PDB entry 5fzi

View 5fzi on RCSB PDB site
Description: Crystal structure of the catalytic domain of human JARID1B in complex with MC3095
Class: oxidoreductase
Keywords: oxidoreductase, jarid1b, plu1
Deposited on 2016-03-14, released 2017-03-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lysine-specific demethylase 5B
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UGL1 (82-End)
      • expression tag (0-1)
      • linker (78-81)
    Domains in SCOPe 2.08: d5fzia1, d5fzia2, d5fzia3
  • Heterogens: ZN, MN, EDO, DMS, FIG, PO4, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5fziA (A:)
smflpppecpvfepsweefadpfafihkirpiaeqtgickvrpppdwqppfacdvdklhf
tpriqrlneleaqtrvklggggardytlrtfgemadafksdyfnmpvhmvptelvekefw
rlvstieedvtveygadiaskefgsgfpvrdgkiklspeeeeyldsgwnlnnmpvmeqsv
lahitadicgmklpwlyvgmcfssfcwhiedhwsysinylhwgepktwygvpgyaaeqle
nvmkklapelfvsqpdllhqlvtimnpntlmthevpvyrtnqcagefvitfprayhsgfn
qgfnfaeavnfctvdwlplgrqcvehyrllhrycvfshdemickmaskadvldvvvastv
qkdmaimiedekalretvrklgvidsermdfellpdderqcvkckttcfmsaiscsckpg
llvclhhvkelcscppykyklryrytlddlypmmnalklraesynewalnvnealeaki

    Sequence, based on observed residues (ATOM records): (download) 
    >5fziA (A:)
smflpppecpvfepsweefadpfafihkirpiaeqtgickvrpppdwqppfacdvdklhf
tpriqrlneleaqtrvklggggardytlrtfgemadafksdyfnmpvhmvptelvekefw
rlvstieedvtveygadiaskefgsgfpvrdgiklspeeeeyldsgwnlnnmpvmeqsvl
ahitadicgmklpwlyvgmcfssfcwhiedhwsysinylhwgepktwygvpgyaaeqlen
vmkklapelfvsqpdllhqlvtimnpntlmthevpvyrtnqcagefvitfprayhsgfnq
gfnfaeavnfctvdwlplgrqcvehyrllhrycvfshdemickmaskadvldvvvastvq
kdmaimiedekalretvrklgvidsermdfellpdderqcvkckttcfmsaiscsckpgl
lvclhhvkelcscppykyklryrytlddlypmmnalklrae