PDB entry 5fvg

View 5fvg on RCSB PDB site
Description: Structure of IrisFP at 100 K.
Class: fluorescent protein
Keywords: fluorescent protein, flurescent protein
Deposited on 2016-02-07, released 2017-01-11
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-01-11, with a file datestamp of 2017-01-06.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Green to red photoconvertible GFP-like protein EosFP
    Species: Lobophyllia hemprichii [TaxId:46758]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5S6Z9 (2-224)
      • chromophore (65)
      • conflict (174)
      • conflict (192)
    Domains in SCOPe 2.06: d5fvga_
  • Chain 'B':
    Compound: Green to red photoconvertible GFP-like protein EosFP
    Species: Lobophyllia hemprichii [TaxId:46758]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5S6Z9 (2-224)
      • expression tag (0-1)
      • chromophore (65)
      • conflict (174)
      • conflict (192)
    Domains in SCOPe 2.06: d5fvgb1, d5fvgb2
  • Chain 'C':
    Compound: Green to red photoconvertible GFP-like protein EosFP
    Species: Lobophyllia hemprichii [TaxId:46758]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5S6Z9 (2-224)
      • expression tag (0-1)
      • chromophore (65)
      • conflict (174)
      • conflict (192)
    Domains in SCOPe 2.06: d5fvgc1, d5fvgc2
  • Chain 'D':
    Compound: Green to red photoconvertible GFP-like protein EosFP
    Species: Lobophyllia hemprichii [TaxId:46758]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5S6Z9 (2-224)
      • chromophore (65)
      • conflict (174)
      • conflict (192)
    Domains in SCOPe 2.06: d5fvgd_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5fvgA (A:)
hhmsaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilt
tafhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkv
rfhgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttyk
akekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdn

    Sequence, based on observed residues (ATOM records): (download) 
    >5fvgA (A:)
msaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdiltta
fhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkvrf
hgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttykak
ekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdn

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5fvgB (B:)
hhmsaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilt
tafhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkv
rfhgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttyk
akekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdn

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5fvgC (C:)
hhmsaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilt
tafhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkv
rfhgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttyk
akekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdn

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5fvgD (D:)
hhmsaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdilt
tafhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkv
rfhgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttyk
akekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdn

    Sequence, based on observed residues (ATOM records): (download) 
    >5fvgD (D:)
msaikpdmkinlrmegnvnghhfvidgdgtgkpfegkqsmdlevkeggplpfafdiltta
fhygnrvfaeypdhiqdyfkqsfpkgyswersltfedggiciarnditmegdtfynkvrf
hgvnfpangpvmqkktlkwepstekmyvrdgvltgditmalllegnahyrcdsrttykak
ekgvklpgyhlvdhcieilshdkdynkvklyehavahsglpdn