SCOPe 2.06: Structural Classification of Proteins

PDB entry 5fse

View 5fse on RCSB PDB site
Description: 2.07 A resolution 1,4-Benzoquinone inhibited Sporosarcina pasteurii urease
Class: hydrolase
Keywords: hydrolase, urease, sporosarcina pasteurii, nickel, metalloenzyme, 1, 4-benzoquinone
Deposited on 2016-01-04, released 2016-03-23
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-04-06, with a file datestamp of 2016-04-01.
Experiment type: XRAY
Resolution: 2.07 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Urease subunit gamma
Species: Sporosarcina pasteurii [TaxId:1474]
Database cross-references and differences (RAF-indexed):
- Uniprot P41022 (0-99)
  - conflict (19)
  - conflict (21)
Domains in SCOPe 2.06: d5fsea_
Chain 'B':
Compound: urease subunit beta
Species: Sporosarcina pasteurii [TaxId:1474]
Database cross-references and differences (RAF-indexed):
- Uniprot P41021 (Start-125)
Domains in SCOPe 2.06: d5fseb_
Chain 'C':
Compound: urease subunit alpha
Species: Sporosarcina pasteurii [TaxId:1474]
Database cross-references and differences (RAF-indexed):
- Uniprot P41020 (0-569)
  - conflict (18)
  - conflict (27)
  - insertion (28)
  - conflict (35-37)
  - conflict (41)
  - conflict (262)
  - conflict (402)
  - conflict (419)
Heterogens: EDO, SO4, NI, OH, HQE, HOH

PDB Chain Sequences:

Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)

>5fseA (A:)
mhlnpaekeklqiflaselalkrkarglklnypeavaiitsfimegardgktvamlmeeg
khvltrddvmegvpemiddiqaeatfpdgtklvtvhnpis

Chain 'B':
Sequence, based on SEQRES records: (download)

>5fseB (B:)
msnnnyivpgeyrvaegeieinagrekttirvsntgdrpiqvgshihfvevnkellfdra
egigrrlnipsgtaarfepgeemeveltelggnrevfgisdltngsvdnkelilqrakel
gykgve

Sequence, based on observed residues (ATOM records): (download)

>5fseB (B:)
nyivpgeyrvaegeieinagrekttirvsntgdrpiqvgshihfvevnkellfdraegig
rrlnipsgtaarfepgeemeveltelggnrevfgisdltngsvdnkelilqrakelgykg
ve

Chain 'C':
No sequence available.