PDB entry 5fnb

View 5fnb on RCSB PDB site
Description: crystal structure of fungal versatile peroxidase from pleurotus eryngii septuple mutant e37k, h39r, v160a, t184m, q202l, d213a & g330r
Class: oxidoreductase
Keywords: oxidoreductase, class II (fungal) peroxidases, protoporphyrin ix, electron t lignin peroxidase, lignin degradation, manganese peroxidase, independent oxidation phenolic non-phenolic aromatics, mnii oxidation, peroxidase, polyvalent peroxidase, oxidoreductase hydrogen peroxide, iron, manganese, metal-binding, secreted
Deposited on 2015-11-13, released 2016-07-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-07-13, with a file datestamp of 2016-07-08.
Experiment type: XRAY
Resolution: 1.79 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: versatile peroxidase vpl2
    Species: Pleurotus eryngii [TaxId:5323]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O94753 (0-328)
      • engineered mutation (36)
      • engineered mutation (38)
      • engineered mutation (159)
      • engineered mutation (183)
      • engineered mutation (201)
      • engineered mutation (212)
    Domains in SCOPe 2.08: d5fnba_
  • Chain 'B':
    Compound: versatile peroxidase vpl2
    Species: Pleurotus eryngii [TaxId:5323]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O94753 (0-328)
      • engineered mutation (36)
      • engineered mutation (38)
      • engineered mutation (159)
      • engineered mutation (183)
      • engineered mutation (201)
    Domains in SCOPe 2.08: d5fnbb_
  • Heterogens: CA, HEM, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5fnbA (A:)
atcddgrttanaaccilfpilddiqenlfdgaqcgekvreslrltfhdaigfsptlgggg
adgsiiafdtietnfpanagideivsaqkpfvakhnisagdfiqfagavgvsncpggvri
pfflgrpdavaaspdhlvpepfdsvdsilarmgdagfspaevvwllashsiaaadkvdps
ipgmpfdstpgvfdsqffietllkgrlfpgtaankgeaqsplqgeirlqsdhllardpqt
acewqsmvnnqpkiqnrfaatmskmallgqdktklidcsdviptppalvgaahlpagfsl
sdveqacaatpfpaltadpgpvtsvppvprs

    Sequence, based on observed residues (ATOM records): (download) 
    >5fnbA (A:)
atcddgrttanaaccilfpilddiqenlfdgaqcgekvreslrltfhdaigfsptlgggg
adgsiiafdtietnfpanagideivsaqkpfvakhnisagdfiqfagavgvsncpggvri
pfflgrpdavaaspdhlvpepfdsvdsilarmgdagfspaevvwllashsiaaadkvdps
ipgmpfdstpgvfdsqffietllkgrlfpgtaankgeaqsplqgeirlqsdhllardpqt
acewqsmvnnqpkiqnrfaatmskmallgqdktklidcsdviptppalvgaahlpagfsl
sdveqacaatpfpaltadpgpvtsvppvp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5fnbB (B:)
atcddgrttanaaccilfpilddiqenlfdgaqcgekvreslrltfhdaigfsptlgggg
adgsiiafdtietnfpanagideivsaqkpfvakhnisagdfiqfagavgvsncpggvri
pfflgrpdavaaspdhlvpepfdsvdsilarmgdagfspaevvwllashsiaaadkvdps
ipgmpfdstpgvfdsqffietllkgrlfpgtaankgeaqsplqgeirlqsdhllardpqt
acewqsmvnnqpkiqnrfaatmskmallgqdktklidcsdviptppalvgaahlpagfsl
sdveqacaatpfpaltadpgpvtsvppvprs

    Sequence, based on observed residues (ATOM records): (download) 
    >5fnbB (B:)
atcddgrttanaaccilfpilddiqenlfdgaqcgekvreslrltfhdaigfsptlgggg
adgsiiafdtietnfpanagideivsaqkpfvakhnisagdfiqfagavgvsncpggvri
pfflgrpdavaaspdhlvpepfdsvdsilarmgdagfspaevvwllashsiaaagmpfds
tpgvfdsqffietllkgrlnkgeaqsplqgeirlqsdhllardpqtacewqsmvnnqpki
qnrfaatmskmallgqdktklidcsdviptppalvgaahlpagfslsdveqacaatpfpa
ltadpgpvtsvppvp