PDB entry 5ffm

View 5ffm on RCSB PDB site
Description: Yellow fever virus helicase
Class: hydrolase
Keywords: DEAD helicase RNA triphosphatase, HYDROLASE
Deposited on 2015-12-18, released 2015-12-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-12-30, with a file datestamp of 2015-12-24.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Serine protease NS3
    Species: Yellow fever virus (strain 17D vaccine) [TaxId:11090]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03314 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.08: d5ffma1, d5ffma2, d5ffma3
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5ffmA (A:)
gshmlkkgmttvldfhpgagktrrflpqilaecarrrlrtlvlaptrvvlsemkeafhgl
dvkfhtqafsahgsgrevidamchatltyrmleptrvvnweviimdeahfldpasiaarg
waahraranesatilmtatppgtsdefphsngeiedvqtdipsepwntghdwiladkrpt
awflpsiraanvmaaslrkagksvvvlnrktfereyptikqkkpdfilatdiaemganlc
vervldcrtafkpvlvdegrkvaikgplrisassaaqrrgrigrnpnrdgdsyyysepts
ennahhvcwleasmlldnmevrggmvaplygvegtktpvspgemrlrddqrkvfrelvrn
cdlpvwlswqvakaglktndrkwcfegpeeheilndsgetvkcrapggakkplrprwcde
rvssdqsalsefikfaegrr

    Sequence, based on observed residues (ATOM records): (download) 
    >5ffmA (A:)
shmlkkgmttvldfhpgtrrflpqilaecarrrlrtlvlaptrvvlsemkeafhgldvkf
htqafsaevidamchatltyrmleptrvvnweviimdeahfldpasiaargwaahraran
esatilmtatppgtsdefphsngeiedvqtdipsepwntghdwiladkrptawflpsira
anvmaaslrkagksvvvlnrkkpdfilatdiaemganlcvervldcrtafkpvlvdegrk
vaikgplrisassaaqrrgrigrnpnrdgdsyyyseptsennahhvcwleasmlldnmev
rggmvaplygvegtktpvspgemrlrddqrkvfrelvrncdlpvwlswqvakaglktndr
kwcfegpeeheilndsgetvkcrapggakkplrprwcdervssdqsalsefikfaeg