PDB entry 5ffg

View 5ffg on RCSB PDB site
Description: Crystal structure of integrin alpha V beta 6 head
Class: cell adhesion
Keywords: integrin, CELL ADHESION
Deposited on 2015-12-18, released 2017-01-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Integrin alpha-V
    Species: Homo sapiens [TaxId:9606]
    Gene: ITGAV, MSK8, VNRA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P06756 (0-End)
      • insertion (399)
      • conflict (400)
    Domains in SCOPe 2.08: d5ffga1, d5ffga2
  • Chain 'B':
    Compound: integrin beta-6
    Species: Homo sapiens [TaxId:9606]
    Gene: ITGB6
    Database cross-references and differences (RAF-indexed):
    • Uniprot P18564
      • conflict (159)
  • Heterogens: CA, NAG, SO4, MES, PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5ffgA (A:)
    fnldvdspaeysgpegsyfgfavdffvpsassrmfllvgapkanttqpgiveggqvlkcd
    wsstrrcqpiefdatgnrdyakddplefkshqwfgasvrskqdkilacaplyhwrtemkq
    erepvgtcflqdgtktveyapcrsqdidadgqgfcqggfsidftkadrvllggpgsfywq
    gqlisdqvaeivskydpnvysikynnqlatrtaqaifddsylgysvavgdfngdgiddfv
    sgvpraartlgmvyiydgknmsslynftgeqmaayfgfsvaatdingddyadvfigaplf
    mdrgsdgklqevgqvsvslqrasgdfqttklngfevfarfgsaiaplgdldqdgfndiai
    aapyggedkkgivyifngrstglnavpsqilegqwaarsgcppsfgysmkgatdidkngy
    pdlivgafgvdrailyrarpvitvnaglevypsilnqdnktcslpgtalkvscfnvrfcl
    kadgkgvlprklnfqvellldklkqkgairralflysrspshsknmtisrgglmqceeli
    aylrdesefrdkltpitifmeyrldyrtaadttglqpilnqftpanisrqahilldtggl
    e
    

    Sequence, based on observed residues (ATOM records): (download)
    >5ffgA (A:)
    fnldvdspaeysgpegsyfgfavdffvpsrmfllvgapkanttqpgiveggqvlkcdwss
    trrcqpiefdatgnrdyakddplefkshqwfgasvrskqdkilacaplyhwrtemkqere
    pvgtcflqdgtktveyapcrsqdidadgqgfcqggfsidftkadrvllggpgsfywqgql
    isdqvaeivskydpnvysikynnqlatrtaqaifddsylgysvavgdfngdgiddfvsgv
    praartlgmvyiydgknmsslynftgeqmaayfgfsvaatdingddyadvfigaplfmdr
    gsdgklqevgqvsvslqrasgdfqttklngfevfarfgsaiaplgdldqdgfndiaiaap
    yggedkkgivyifngrstglnavpsqilegqwaarsgcppsfgysmkgatdidkngypdl
    ivgafgvdrailyrarpvitvnaglevypsilnqdnktcslpgtalkvscfnvrfclkad
    gkgvlprklnfqvellldklkqkgairralflysrspshsknmtisrgglmqceeliayl
    rdesefrdkltpitifmeyrldyrtaadttglqpilnqftpanisrqahil
    

  • Chain 'B':
    No sequence available.