PDB entry 5f7i

View 5f7i on RCSB PDB site
Description: Crystal structure of the complex of proliferating cell nuclear antigen from Leishmania donovani with tetrachloro-L-thyronine at 2.95 Angstrom resolution
Class: DNA binding protein
Keywords: DNA binding protein
Deposited on 2015-12-08, released 2016-01-20
Made obsolete by 5b7o on 2016-07-20

The last revision prior to the SCOPe 2.08 freeze date was dated 2016-07-20, with a file datestamp of 2016-07-15.
Experiment type: XRAY
Resolution: 2.95 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Proliferating Cell Nuclear Antigen
    Species: Leishmania donovani [TaxId:5661]
    Gene: PCNA
    Database cross-references and differences (RAF-indexed):
    • Uniprot B5TV91 (1-End)
      • expression tag (0)
    • Uniprot B5TV91 (194-256)
    Domains in SCOPe 2.08: d5f7ia1, d5f7ia2, d5f7ia3
  • Chain 'B':
    Compound: Proliferating Cell Nuclear Antigen
    Species: Leishmania donovani [TaxId:5661]
    Gene: PCNA
    Database cross-references and differences (RAF-indexed):
    • Uniprot B5TV91 (1-End)
      • expression tag (0)
    • Uniprot B5TV91 (194-256)
    Domains in SCOPe 2.08: d5f7ib1, d5f7ib2, d5f7ib3
  • Chain 'C':
    Compound: Proliferating Cell Nuclear Antigen
    Species: Leishmania donovani [TaxId:5661]
    Gene: PCNA
    Database cross-references and differences (RAF-indexed):
    • Uniprot B5TV91 (1-End)
      • expression tag (0)
    • Uniprot B5TV91 (194-256)
    Domains in SCOPe 2.08: d5f7ic1, d5f7ic2, d5f7ic3
  • Chain 'D':
    Compound: Proliferating Cell Nuclear Antigen
    Species: Leishmania donovani [TaxId:5661]
    Gene: PCNA
    Database cross-references and differences (RAF-indexed):
    • Uniprot B5TV91 (1-End)
      • expression tag (0)
    • Uniprot B5TV91 (194-256)
    Domains in SCOPe 2.08: d5f7id1, d5f7id2, d5f7id3
  • Chain 'E':
    Compound: Proliferating Cell Nuclear Antigen
    Species: Leishmania donovani [TaxId:5661]
    Gene: PCNA
    Database cross-references and differences (RAF-indexed):
    • Uniprot B5TV91 (1-End)
      • expression tag (0)
    • Uniprot B5TV91 (194-256)
    Domains in SCOPe 2.08: d5f7ie1, d5f7ie2, d5f7ie3
  • Chain 'F':
    Compound: Proliferating Cell Nuclear Antigen
    Species: Leishmania donovani [TaxId:5661]
    Gene: PCNA
    Database cross-references and differences (RAF-indexed):
    • Uniprot B5TV91 (1-End)
      • expression tag (0)
    • Uniprot B5TV91 (194-256)
    Domains in SCOPe 2.08: d5f7if1, d5f7if2, d5f7if3
  • Heterogens: TLV, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5f7iA (A:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrstkgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmvey
gidnvgylryylapkvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5f7iA (A:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmveygid
nvgylryylapkvd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5f7iB (B:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrstkgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmvey
gidnvgylryylapkvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5f7iB (B:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmveygid
nvgylryylapkvd

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5f7iC (C:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrstkgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmvey
gidnvgylryylapkvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5f7iC (C:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmveygid
nvgylryylapkvd

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5f7iD (D:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrstkgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmvey
gidnvgylryylapkvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5f7iD (D:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmveygid
nvgylryylapkvd

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5f7iE (E:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrstkgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmvey
gidnvgylryylapkvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5f7iE (E:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmveygid
nvgylryylapkvd

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5f7iF (F:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrstkgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmvey
gidnvgylryylapkvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5f7iF (F:)
hmleaqvqfaslwkrlvecinglvneanfdcnpgglsvqamdsshvalvhmllrddcfvk
yqcgrnsilglnlaslskvlkivdsndslslrhdddsdvvtltsenpektrkceyqlkll
eieaesmgipemdyrstvtlnsaefakivrdmqvfgdtvtiaiskegvkfsssgdvgqgy
tflqaagvsdrgvevtmeepitlsfalrfmgifakgstlservtlkfakdspcmveygid
nvgylryylapkvd