PDB entry 5etz

View 5etz on RCSB PDB site
Description: Structure of the all-trans isomer of pharaonis halorhodopsin in the absence of halide ions
Class: membrane protein
Keywords: retinal protein, light-driven, chloride ion pump, seven-transmembrane, alpha helices, MEMBRANE PROTEIN
Deposited on 2015-11-18, released 2016-07-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-10-14, with a file datestamp of 2020-10-09.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: halorhodopsin
    Species: Natronomonas pharaonis DSM 2160 [TaxId:348780]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5etza_
  • Chain 'B':
    Compound: halorhodopsin
    Species: Natronomonas pharaonis DSM 2160 [TaxId:348780]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5etzb_
  • Chain 'D':
    Compound: halorhodopsin
    Species: Natronomonas pharaonis DSM 2160 [TaxId:348780]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5etzd_
  • Heterogens: RET, 22B, L3P, BNG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5etzA (A:)
mtetlppvtesavalqaevtqrelfefvlndpllasslyinialaglsillfvfmtrgld
dprakliavstilvpvvsiasytglasgltisvlempaghfaegssvmlggeevdgvvtm
wgryltwalstpmillalgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwy
aiscacfivvlyillvewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlp
vgytswaysaldivakyifaflllnyltsnegvvsgsildvpsasgapadd

    Sequence, based on observed residues (ATOM records): (download) 
    >5etzA (A:)
evtqrelfefvlndpllasslyinialaglsillfvfmtrglddprakliavstilvpvv
siasytglasgltisvlempaghfaegssvmlggeevdgvvtmwgryltwalstpmilla
lgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwyaiscacfivvlyillve
waqdakaagtadifstlklltvvmwlgypivwalgvegvavlpvgytswaysaldivaky
ifaflllnyltsnegvvsgsi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5etzB (B:)
mtetlppvtesavalqaevtqrelfefvlndpllasslyinialaglsillfvfmtrgld
dprakliavstilvpvvsiasytglasgltisvlempaghfaegssvmlggeevdgvvtm
wgryltwalstpmillalgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwy
aiscacfivvlyillvewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlp
vgytswaysaldivakyifaflllnyltsnegvvsgsildvpsasgapadd

    Sequence, based on observed residues (ATOM records): (download) 
    >5etzB (B:)
evtqrelfefvlndpllasslyinialaglsillfvfmtrglddprakliavstilvpvv
siasytglasgltisvlempaghfaegssvmlggeevdgvvtmwgryltwalstpmilla
lgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwyaiscacfivvlyillve
waqdakaagtadifstlklltvvmwlgypivwalgvegvavlpvgytswaysaldivaky
ifaflllnyltsnegvvsgs

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5etzD (D:)
mtetlppvtesavalqaevtqrelfefvlndpllasslyinialaglsillfvfmtrgld
dprakliavstilvpvvsiasytglasgltisvlempaghfaegssvmlggeevdgvvtm
wgryltwalstpmillalgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwy
aiscacfivvlyillvewaqdakaagtadifstlklltvvmwlgypivwalgvegvavlp
vgytswaysaldivakyifaflllnyltsnegvvsgsildvpsasgapadd

    Sequence, based on observed residues (ATOM records): (download) 
    >5etzD (D:)
evtqrelfefvlndpllasslyinialaglsillfvfmtrglddprakliavstilvpvv
siasytglasgltisvlempaghfaegssvmlggeevdgvvtmwgryltwalstpmilla
lgllagsnatklftaitfdiamcvtglaaalttsshlmrwfwyaiscacfivvlyillve
waqdakaagtadifstlklltvvmwlgypivwalgvegvavlpvgytswaysaldivaky
ifaflllnyltsnegvvsgs