PDB entry 5ehm

View 5ehm on RCSB PDB site
Description: Crystal structure of the Drosophila CG3822 KaiR1D ligand binding domain complex with NMDA
Class: membrane protein
Keywords: Membrane protein
Deposited on 2015-10-28, released 2016-11-09
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-11-09, with a file datestamp of 2016-11-04.
Experiment type: XRAY
Resolution: 1.28 Å
R-factor: N/A
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RE06730p,CG3822
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3822, Dmel_CG3822
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8MS48 (2-120)
      • linker (121-122)
    • Uniprot Q9VDH5 (123-End)
    Domains in SCOPe 2.06: d5ehma_
  • Chain 'B':
    Compound: RE06730p,CG3822
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3822, Dmel_CG3822
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8MS48 (Start-120)
      • linker (121-122)
    • Uniprot Q9VDH5 (123-End)
    Domains in SCOPe 2.06: d5ehmb_
  • Heterogens: OEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5ehmA (A:)
gsanlknktlvvttilsnpycmrkesaiplsgndqfegyavdliheiskslgfnykiqlv
pdgsygslnkltgewngmirelleqradlaiadltitfereqavdfttpfmnlgvsilyr
kgtpiesaedlakqtrikygalkggstaaffrdskistyqrmwsfmesarpsvftasnge
gvervakgkgsyaflmestsieyvternceltqvggmldtksygiatppnspyrtainsv
ilklqeegklhilktkwwkekrgggkcr

    Sequence, based on observed residues (ATOM records): (download) 
    >5ehmA (A:)
anlknktlvvttilsnpycmrkesaiplsgndqfegyavdliheiskslgfnykiqlvpd
gsygslnkltgewngmirelleqradlaiadltitfereqavdfttpfmnlgvsilyrkg
tpiesaedlakqtrikygalkggstaaffrdskistyqrmwsfmesarpsvftasngegv
ervakgkgsyaflmestsieyvternceltqvggmldtksygiatppnspyrtainsvil
klqeegklhilktkwwkekrg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5ehmB (B:)
gsanlknktlvvttilsnpycmrkesaiplsgndqfegyavdliheiskslgfnykiqlv
pdgsygslnkltgewngmirelleqradlaiadltitfereqavdfttpfmnlgvsilyr
kgtpiesaedlakqtrikygalkggstaaffrdskistyqrmwsfmesarpsvftasnge
gvervakgkgsyaflmestsieyvternceltqvggmldtksygiatppnspyrtainsv
ilklqeegklhilktkwwkekrgggkcr

    Sequence, based on observed residues (ATOM records): (download) 
    >5ehmB (B:)
ktlvvttilsnpycmrkesaiplsgndqfegyavdliheiskslgfnykiqlvpdgsygs
lnkltgewngmirelleqradlaiadltitfereqavdfttpfmnlgvsilyrkgtpies
aedlakqtrikygalkggstaaffrdskistyqrmwsfmesarpsvftasngegvervak
gkgsyaflmestsieyvternceltqvggmldtksygiatppnspyrtainsvilklqee
gklhilktkwwkekrgg