PDB entry 5egr

View 5egr on RCSB PDB site
Description: tRNA guanine transglycosylase (TGT) in complex with an Immucillin derivative
Class: transferase
Keywords: Transition state analog, shigellosis, Immucillin, modeling, TRANSFERASE, TRANSFERASE INHIBITOR
Deposited on 2015-10-27, released 2016-11-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-08-19, with a file datestamp of 2020-08-14.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Queuine tRNA-ribosyltransferase
    Species: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) [TaxId:264203]
    Gene: tgt, ZMO0363
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28720
      • conflict (311)
    Domains in SCOPe 2.08: d5egra_
  • Heterogens: GOL, ZN, 5NT, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5egrA (A:)
mveataqetdrprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvr
atgadiilgntyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqsee
gvtfkshldgsrhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwak
rsrdafdsrkeqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdem
frvldfsvpmlpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpi
nirnarfsedlkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqk
irdsisegrfsqfaqdfraryfarns

    Sequence, based on observed residues (ATOM records): (download) 
    >5egrA (A:)
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmsltkqseegvtfhmlspersi
eiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaalfgi
qqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlpddkphylmg
vgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldsechca
vcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdfrary
fa