PDB entry 5eeg

View 5eeg on RCSB PDB site
Description: Crystal structure of carminomycin-4-O-methyltransferase DnrK in complex with tetrazole-SAH
Class: transferase
Keywords: unnatural substrate, Structural Genomics, PSI-Biology, Protein Structure Initiative, Enzyme Discovery for Natural Product Biosynthesis, NatPro, TRANSFERASE
Deposited on 2015-10-22, released 2015-12-23
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-20, with a file datestamp of 2017-09-15.
Experiment type: XRAY
Resolution: 2.26 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Carminomycin 4-O-methyltransferase DnrK
    Species: Streptomyces peucetius [TaxId:1950]
    Gene: dnrk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5eega1, d5eega2
  • Chain 'B':
    Compound: Carminomycin 4-O-methyltransferase DnrK
    Species: Streptomyces peucetius [TaxId:1950]
    Gene: dnrk
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5eegb1, d5eegb2
  • Heterogens: S8M, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5eegA (A:)
    mgsshhhhhhssglvprgshmtaeptvaarpqqidalrtlirlgslhtpmvvrtaatlrl
    vdhilagartvkalaartdtrpeallrlirhlvaiglleedapgefvptevgelladdhp
    aaqrawhdltqavaradisftrlpdairtgrptyesiygkpfyedlagrpdlrasfdsll
    acdqdvafdapaaaydwtnvrhvldvgggkggfaaaiarraphvsatvlemagtvdtars
    ylkdeglsdrvdvvegdffeplprkadaiilsfvllnwpdhdavriltrcaealepggri
    liherddlhensfneqfteldlrmlvflggalrtrekwdglaasaglvveevrqlpspti
    pydlsllvlapaatga
    

    Sequence, based on observed residues (ATOM records): (download)
    >5eegA (A:)
    dalrtlirlgslhtpmvvrtaatlrlvdhilagartvkalaartdtrpeallrlirhlva
    iglleedapgefvptevgelladdhpaaqrawhdltqavaradisftrlpdairtgrpty
    esiygkpfyedlagrpdlrasfdsllacdqdvafdapaaaydwtnvrhvldvgggkggfa
    aaiarraphvsatvlemagtvdtarsylkdeglsdrvdvvegdffeplprkadaiilsfv
    llnwpdhdavriltrcaealepggriliherddlhensfneqfteldlrmlvflggalrt
    rekwdglaasaglvveevrqlydlsllvlapa
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5eegB (B:)
    mgsshhhhhhssglvprgshmtaeptvaarpqqidalrtlirlgslhtpmvvrtaatlrl
    vdhilagartvkalaartdtrpeallrlirhlvaiglleedapgefvptevgelladdhp
    aaqrawhdltqavaradisftrlpdairtgrptyesiygkpfyedlagrpdlrasfdsll
    acdqdvafdapaaaydwtnvrhvldvgggkggfaaaiarraphvsatvlemagtvdtars
    ylkdeglsdrvdvvegdffeplprkadaiilsfvllnwpdhdavriltrcaealepggri
    liherddlhensfneqfteldlrmlvflggalrtrekwdglaasaglvveevrqlpspti
    pydlsllvlapaatga
    

    Sequence, based on observed residues (ATOM records): (download)
    >5eegB (B:)
    dalrtlirlgslhtpmvvrtaatlrlvdhilagartvkalaartdtrpeallrlirhlva
    iglleedapgefvptevgelladdhpaaqrawhdltqavaradisftrlpdairtgrpty
    esiygkpfyedlagrpdlrasfdsllacdqdvafdapaaaydwtnvrhvldvgggkggfa
    aaiarraphvsatvlemagtvdtarsylkdeglsdrvdvvegdffeplprkadaiilsfv
    llnwpdhdavriltrcaealepggriliherddlhensfneqfteldlrmlvflggalrt
    rekwdglaasaglvveevrqlpsdlsllvlapa