PDB entry 5ecm

View 5ecm on RCSB PDB site
Description: Crystal Structure of FIN219-FIP1 complex with JA and Leu
Class: ligase/transferase
Keywords: Jasmonate-amido synthetase, Glutathione S-transferase, Ligase-Transferase complex
Deposited on 2015-10-20, released 2016-11-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-03-22, with a file datestamp of 2017-03-17.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Jasmonic acid-amido synthetase JAR1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: JAR1, FIN219, At2g46370, F11C10.6
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Glutathione S-transferase U20
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GSTU20, FIP1, At1g78370, F3F9.11
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ecmb1, d5ecmb2
  • Chain 'C':
    Compound: Glutathione S-transferase U20
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GSTU20, FIP1, At1g78370, F3F9.11
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ecmc1, d5ecmc2
  • Chain 'D':
    Compound: Jasmonic acid-amido synthetase JAR1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: JAR1, FIN219, At2g46370, F11C10.6
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Glutathione S-transferase U20
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GSTU20, FIP1, At1g78370, F3F9.11
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ecme1, d5ecme2
  • Chain 'F':
    Compound: Glutathione S-transferase U20
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GSTU20, FIP1, At1g78370, F3F9.11
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ecmf1, d5ecmf2
  • Heterogens: JAA, LEU, GSH, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5ecmB (B:)
hhhhhhmanlpilldywpsmfgmrarvalrekgvefeyreedfsnksplllqsnpihkki
pvlvhngkpvceslnvvqyvdeawpeknpffpsdpygraqarfwadfvdkkftdaqfkvw
gkkgeeqeagkkefieavkileselgdkpyfggdsfgyvdislitfsswfqayekfgnfs
iesespkliawakrcmekesvskslpdsekivayaaeyrknnl

    Sequence, based on observed residues (ATOM records): (download) 
    >5ecmB (B:)
lpilldywpsmfgmrarvalrekgvefeyreedfsnksplllqsnpihkkipvlvhngkp
vceslnvvqyvdeawpeknpffpsdpygraqarfwadfvdkkftdaqfkvwgkkgeeqea
gkkefieavkileselgdkpyfggdsfgyvdislitfsswfqayekfgnfsiesespkli
awakrcmekesvskslpdsekivayaaeyrknnl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5ecmC (C:)
hhhhhhmanlpilldywpsmfgmrarvalrekgvefeyreedfsnksplllqsnpihkki
pvlvhngkpvceslnvvqyvdeawpeknpffpsdpygraqarfwadfvdkkftdaqfkvw
gkkgeeqeagkkefieavkileselgdkpyfggdsfgyvdislitfsswfqayekfgnfs
iesespkliawakrcmekesvskslpdsekivayaaeyrknnl

    Sequence, based on observed residues (ATOM records): (download) 
    >5ecmC (C:)
lpilldywpsmfgmrarvalrekgvefeyreedfsnksplllqsnpihkkipvlvhngkp
vceslnvvqyvdeawpeknpffpsdpygraqarfwadfvdkkftdaqfkvwgkkgeeqea
gkkefieavkileselgdkpyfggdsfgyvdislitfsswfqayekfgnfsiesespkli
awakrcmekesvskslpdsekivayaaeyrknnl

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5ecmE (E:)
hhhhhhmanlpilldywpsmfgmrarvalrekgvefeyreedfsnksplllqsnpihkki
pvlvhngkpvceslnvvqyvdeawpeknpffpsdpygraqarfwadfvdkkftdaqfkvw
gkkgeeqeagkkefieavkileselgdkpyfggdsfgyvdislitfsswfqayekfgnfs
iesespkliawakrcmekesvskslpdsekivayaaeyrknnl

    Sequence, based on observed residues (ATOM records): (download) 
    >5ecmE (E:)
lpilldywpsmfgmrarvalrekgvefeyreedfsnksplllqsnpihkkipvlvhngkp
vceslnvvqyvdeawpeknpffpsdpygraqarfwadfvdkkftdaqfkvwgkkgeeqea
gkkefieavkileselgdkpyfggdsfgyvdislitfsswfqayekfgnfsiesespkli
awakrcmekesvskslpdsekivayaaeyrknnl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5ecmF (F:)
hhhhhhmanlpilldywpsmfgmrarvalrekgvefeyreedfsnksplllqsnpihkki
pvlvhngkpvceslnvvqyvdeawpeknpffpsdpygraqarfwadfvdkkftdaqfkvw
gkkgeeqeagkkefieavkileselgdkpyfggdsfgyvdislitfsswfqayekfgnfs
iesespkliawakrcmekesvskslpdsekivayaaeyrknnl

    Sequence, based on observed residues (ATOM records): (download) 
    >5ecmF (F:)
lpilldywpsmfgmrarvalrekgvefeyreedfsnksplllqsnpihkkipvlvhngkp
vceslnvvqyvdeawpeknpffpsdpygraqarfwadfvdkkftdaqfkvwgkkgeeqea
gkkefieavkileselgdkpyfggdsfgyvdislitfsswfqayekfgnfsiesespkli
awakrcmekesvskslpdsekivayaaeyrknnl