PDB entry 5e5d

View 5e5d on RCSB PDB site
Description: Native structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv. oryzae
Class: hydrolase
Keywords: HYDROLASE, peptide deformylase, metal binding protein
Deposited on 2015-10-08, released 2016-10-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-10-12, with a file datestamp of 2016-10-07.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide deformylase
    Species: Xanthomonas oryzae pv. oryzae KACC10331 [TaxId:291331]
    Gene: def, XOO1075
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5e5da_
  • Heterogens: CD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5e5dA (A:)
msvpitrslqflravhswlkiarlrsgsysklhvtifrstpmirdiirmgdkrllrvapq
vtnlgsaelhalvsdmfetmgaahgvglaapqiavdlqlmvfgfeaserypeapavplta
lanaqieplsdemengwegclsipglravipryryiryrgfapdgspiereaegfharvv
qheydhlvgrlypsrienfdtfgfddvlsydl

    Sequence, based on observed residues (ATOM records): (download) 
    >5e5dA (A:)
mirdiirmgdkrllrvapqvtnlgsaelhalvsdmfetmgaahgvglaapqiavdlqlmv
fgfeaserypeapavpltalanaqieplsdemengwegclsipglravipryryiryrgf
apdgspiereaegfharvvqheydhlvgrlypsrienfdtfgfddvlsyd