PDB entry 5e32
View 5e32 on RCSB PDB site
Description: Crystal structure of H5 hemagglutinin mutant (N224K, Q226L, N158D and L133a deletion) from the influenza virus A/chicken/Vietnam/NCVD-093/2008 (H5N1)
Class: viral protein
Keywords: H5N1 influenza virus, hemagglutinin, receptor binding specificity, transmission, glycan complex, VIRAL PROTEIN
Deposited on
2015-10-01, released
2015-12-02
The last revision prior to the SCOPe 2.06 freeze date was dated
2015-12-09, with a file datestamp of
2015-12-04.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.17
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hemagglutinin
Species: Influenza A virus (A/chicken/Vietnam/NCVD-093/2008(H5N1)) [TaxId:581024]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot C4P282 (4-End)
- expression tag (1-3)
- engineered mutation (156)
- engineered mutation (222)
- engineered mutation (224)
Domains in SCOPe 2.06: d5e32a1, d5e32a2 - Chain 'B':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:581024]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5e32b_ - Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5e32A (A:)
adpgdqicvgyhannsteqvdtimeknitvthaqdilekthngklcnlngvkplilkdcs
vagwllgnpmcdeflnvsewsyivekaspanglcypgdfndyeelkhllsrinhfekiki
ipksywsnhetsgvssacsylenpsffrnvvwltkkdntyppikvnytnanqkdllvlwg
ihhpnneaeqkmiyqnlntyvsvgtstlnqrlvpkiatrskvkglsgrmdffwtilkpnd
tinfdsngnfiapeyaykivkkgdsaimkseleygncntkcqtpigainssmpfhnihpl
tigecpkyvksnrlvlatglrnapqiegrrrkr
Sequence, based on observed residues (ATOM records): (download)
>5e32A (A:)
dpgdqicvgyhannsteqvdtimeknitvthaqdilekthngklcnlngvkplilkdcsv
agwllgnpmcdeflnvsewsyivekaspanglcypgdfndyeelkhllsrinhfekikii
pksywsnhetsgvssacsylenpsffrnvvwltkkdntyppikvnytnanqkdllvlwgi
hhpnneaeqkmiyqnlntyvsvgtstlnqrlvpkiatrskvkglsgrmdffwtilkpndt
infdsngnfiapeyaykivkkgdsaimkseleygncntkcqtpigainssmpfhnihplt
igecpkyvksnrlvlatglrnap
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5e32B (B:)
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgitnkinsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlye
kvrlqlrdnakelgngcfefyhkcdnecmesvkngtydypqyseearlnreeisgrlvpr
Sequence, based on observed residues (ATOM records): (download)
>5e32B (B:)
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgitnkinsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlye
kvrlqlrdnakelgngcfefyhkcdnecmesvkngtydypqyseearlnreeisg