PDB entry 5e0q

View 5e0q on RCSB PDB site
Description: Crystal structure of the Nup98 C-terminal domain bound to nanobody TP377
Class: transport protein
Keywords: nuclear pore complex, nuclear transport, autoproteolytic domain, antibody, transport protein
Deposited on 2015-09-29, released 2015-12-16
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-12-16, with a file datestamp of 2015-12-11.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Anti-Nup98 Nanobody TP377
  Species: Vicugna pacos [TaxId:30538]
  Database cross-references and differences (RAF-indexed):
  • PDB 5E0Q (Start-127)
  Domains in SCOPe 2.05: d5e0qa_
• Chain 'B':
  Compound: Nuclear pore complex protein Nup98-Nup96
  Species: Xenopus tropicalis [TaxId:8364]
  Gene: NUP98
  Database cross-references and differences (RAF-indexed):
  • Uniprot J7I6Y1 (2-152)
    • expression tag (1)
    • engineered mutation (107)
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >5e0qA (A:)
  gsqvqlvesgggpveaggslrlscaasgrsfsnsvmawfrqapgkereflsvlnwssgrt
  siadsvkgrftmsrdpakitvylqmnglkpedtavyycaasnrgslytldnqnryedwgq
  gtqvtvss
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >5e0qA (A:)
  qvqlvesgggpveaggslrlscaasgrsfsnsvmawfrqapgkereflsvlnwssgrtsi
  adsvkgrftmsrdpakitvylqmnglkpedtavyycaasnrgslytldnqnryedwgqgt
  qvtvss
  

  
  
• Chain 'B':
  No sequence available.