PDB entry 5e0q

View 5e0q on RCSB PDB site
Description: Crystal structure of the Nup98 C-terminal domain bound to nanobody TP377
Class: transport protein
Keywords: nuclear pore complex, nuclear transport, autoproteolytic domain, antibody, transport protein
Deposited on 2015-09-29, released 2015-12-16
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-12-16, with a file datestamp of 2015-12-11.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Anti-Nup98 Nanobody TP377
    Species: Vicugna pacos [TaxId:30538]
    Database cross-references and differences (RAF-indexed):
    • PDB 5E0Q (Start-127)
    Domains in SCOPe 2.05: d5e0qa_
  • Chain 'B':
    Compound: Nuclear pore complex protein Nup98-Nup96
    Species: Xenopus tropicalis [TaxId:8364]
    Gene: NUP98
    Database cross-references and differences (RAF-indexed):
    • Uniprot J7I6Y1 (2-152)
      • expression tag (1)
      • engineered mutation (107)
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5e0qA (A:)

    Sequence, based on observed residues (ATOM records): (download)
    >5e0qA (A:)

  • Chain 'B':
    No sequence available.