PDB entry 5dzm

View 5dzm on RCSB PDB site
Description: HIV-1 Reverse Transcriptase RH domain
Class: hydrolase
Keywords: HIV, ribonuclease, unfolding, reverse transcriptase, HYDROLASE
Deposited on 2015-09-25, released 2016-05-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribonuclease H
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5dzma_
  • Chain 'B':
    Compound: Ribonuclease H
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5dzmb_
  • Chain 'C':
    Compound: Ribonuclease H
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5dzmc_
  • Chain 'D':
    Compound: Ribonuclease H
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5dzmd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5dzmA (A:)
mnelyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqai
ylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgi
ggneqvdklvsagirkvl

    Sequence, based on observed residues (ATOM records): (download) 
    >5dzmA (A:)
mnelyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqai
ylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5dzmB (B:)
mnelyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqai
ylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgi
ggneqvdklvsagirkvl

    Sequence, based on observed residues (ATOM records): (download) 
    >5dzmB (B:)
lyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqaiyla
lqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5dzmC (C:)
mnelyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqai
ylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgi
ggneqvdklvsagirkvl

    Sequence, based on observed residues (ATOM records): (download) 
    >5dzmC (C:)
mnelyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqai
ylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5dzmD (D:)
mnelyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqai
ylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgi
ggneqvdklvsagirkvl

    Sequence, based on observed residues (ATOM records): (download) 
    >5dzmD (D:)
yqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqaiylal
qdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpa