PDB entry 5dup

View 5dup on RCSB PDB site
Description: Influenza A virus H5 hemagglutinin globular head in complex with antibody AVFluIgG03
Class: immune system
Keywords: Influenza virus, Antibody, Complex, Neutralize, IMMUNE SYSTEM
Deposited on 2015-09-20, released 2015-12-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-12-16, with a file datestamp of 2015-12-11.
Experiment type: XRAY
Resolution: 3.05 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza A virus (A/Anhui/1/2005(H5N1)) [TaxId:370810]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: AVFluIgG03 Heavy Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5DUP (0-End)
    Domains in SCOPe 2.08: d5duph_
  • Chain 'L':
    Compound: AVFluIgG03 Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5DUP (0-End)
    Domains in SCOPe 2.08: d5dupl1, d5dupl2

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >5dupH (H:)
evqllesggglvqpggslrvsctnsgftfsnyamswvrqapgkglewvsaisgnggsgty
yadsvkgrftisrdnskntmylqmnslraedtavyycvrddsydggghyglhnwfdswgq
gtlvtvssstkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtf
pavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkts

    Sequence, based on observed residues (ATOM records): (download) 
    >5dupH (H:)
evqllesggglvqpggslrvsctnsgftfsnyamswvrqapgkglewvsaisgtyyadsv
kgrftisrdnskntmylqmnslraedtavyycvrddsydggghyglhnwfdswgqgtlvt
vssstkgpsvfplapsalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslss
vvtvpsstyicnvnhkpsntkvdkkvep

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >5dupL (L:)
svltqppsvsgapgqrvtisctgsssnigagydvhwyqqlpgtapklliygnsnrpsgvp
drfsgsksgtsaslaitglqaedeadyycqsydssvvvfgggtkleikgtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >5dupL (L:)
svltqppsvsgapgqrvtisctgsssnigagydvhwyqqlpgtapklliygnsnrpsgvp
drfsgsksgtsaslaitglqaedeadyycqsydssvvvfgggtklgtvaapsvfifppsd
eqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltls
kadyekhkvyacevthqglsspvtksfnr