PDB entry 5dtb

View 5dtb on RCSB PDB site
Description: Crystal structure of the Drosophila CG3822 KaiR1D ligand binding domain complex with glutamate
Class: membrane protein
Keywords: Membrane protein
Deposited on 2015-09-17, released 2016-09-28
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-12-21, with a file datestamp of 2016-12-16.
Experiment type: XRAY
Resolution: 1.84 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cg3822
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3822, Dmel_CG3822
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9VDH5 (Start-117)
      • linker (118-121)
    • Uniprot Q9VDH5 (122-266)
    Domains in SCOPe 2.07: d5dtba_
  • Chain 'B':
    Compound: cg3822
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3822, Dmel_CG3822
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9VDH5 (Start-117)
      • linker (118-121)
    • Uniprot Q9VDH5 (122-266)
    Domains in SCOPe 2.07: d5dtbb_
  • Heterogens: GLU, GOL, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5dtbA (A:)
sanlknktlvvttilsnpycmrkesaiplsgndqfegyavdliheiskslgfnykiqlvp
dgsygslnkltgewngmirelleqradlaiadltitfereqavdfttpfmnlgvsilyrk
gtpiesaedlakqtrikygalkggstaaffrdskistyqrmwsfmesarpsvftasngeg
vervakgkgsyaflmestsieyvternceltqvggmldtksygiatppnspyrtainsvi
lklqeegklhilktkwwkekrgggkcr

    Sequence, based on observed residues (ATOM records): (download) 
    >5dtbA (A:)
knktlvvttilsnpycmrkesaiplsgndqfegyavdliheiskslgfnykiqlvpdgsy
gslnkltgewngmirelleqradlaiadltitfereqavdfttpfmnlgvsilyrkgtpi
esaedlakqtrikygalkggstaaffrdskistyqrmwsfmesarpsvftasngegverv
akgkgsyaflmestsieyvternceltqvggmldtksygiatppnspyrtainsvilklq
eegklhilktkwwkekrgggkcr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5dtbB (B:)
sanlknktlvvttilsnpycmrkesaiplsgndqfegyavdliheiskslgfnykiqlvp
dgsygslnkltgewngmirelleqradlaiadltitfereqavdfttpfmnlgvsilyrk
gtpiesaedlakqtrikygalkggstaaffrdskistyqrmwsfmesarpsvftasngeg
vervakgkgsyaflmestsieyvternceltqvggmldtksygiatppnspyrtainsvi
lklqeegklhilktkwwkekrgggkcr

    Sequence, based on observed residues (ATOM records): (download) 
    >5dtbB (B:)
knktlvvttilsnpycmrkesaiplsgndqfegyavdliheiskslgfnykiqlvpdgsy
gslnkltgewngmirelleqradlaiadltitfereqavdfttpfmnlgvsilyrkgtpi
esaedlakqtrikygalkggstaaffrdskistyqrmwsfmesarpsvftasngegverv
akgkgsyaflmestsieyvternceltqvggmldtksygiatppnspyrtainsvilklq
eegklhilktkwwkekrgggkcr