PDB entry 5dor

View 5dor on RCSB PDB site
Description: P2 Integrase catalytic domain in space group P21
Class: hydrolase
Keywords: tyrosine recombinase, integrase, hydrolase
Deposited on 2015-09-11, released 2015-12-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2015-12-02, with a file datestamp of 2015-11-27.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: integrase
    Species: ENTEROBACTERIA PHAGE P2 [TaxId:10679]
    Gene: INT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5dora_
  • Chain 'B':
    Compound: integrase
    Species: ENTEROBACTERIA PHAGE P2 [TaxId:10679]
    Gene: INT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5dorb_
  • Chain 'C':
    Compound: integrase
    Species: ENTEROBACTERIA PHAGE P2 [TaxId:10679]
    Gene: INT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5dorc_
  • Chain 'D':
    Compound: integrase
    Species: ENTEROBACTERIA PHAGE P2 [TaxId:10679]
    Gene: INT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5dord_
  • Heterogens: PO4, ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5dorA (A:)
tgyltqeeialllaaldgdnkkiailclstgarwgeaarlkaeniihnrvtfvktktnkp
rtvpiseavakmiadnkrgflfpdadyprfrrtmkaikpdlpmgqathalrhsfathfmi
nggsiitlqrilghtrieqtmvyahfapeylqdaislnplrggteaesvhtvstve

    Sequence, based on observed residues (ATOM records): (download) 
    >5dorA (A:)
tgyltqeeialllaaldgdnkkiailclstgarwgeaarlkaeniihnrvtfvktnkprt
vpiseavakmiadgflfpdadyprfrrtmkaikpdlpmgqathalrhsfathfminggsi
itlqrilghtrieqtmvyahfapeylqdaislnplrggteae

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5dorB (B:)
tgyltqeeialllaaldgdnkkiailclstgarwgeaarlkaeniihnrvtfvktktnkp
rtvpiseavakmiadnkrgflfpdadyprfrrtmkaikpdlpmgqathalrhsfathfmi
nggsiitlqrilghtrieqtmvyahfapeylqdaislnplrggteaesvhtvstve

    Sequence, based on observed residues (ATOM records): (download) 
    >5dorB (B:)
tgyltqeeialllaaldgdnkkiailclstgarwgeaarlkaeniihnrvtfvkkprtvp
iseavakmiadgflfpdadyprfrrtmkaikpdlpmgqathalrhsfathfminggsiit
lqrilghtrieqtmvyahfapeylqdaislnplrggteaes

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5dorC (C:)
tgyltqeeialllaaldgdnkkiailclstgarwgeaarlkaeniihnrvtfvktktnkp
rtvpiseavakmiadnkrgflfpdadyprfrrtmkaikpdlpmgqathalrhsfathfmi
nggsiitlqrilghtrieqtmvyahfapeylqdaislnplrggteaesvhtvstve

    Sequence, based on observed residues (ATOM records): (download) 
    >5dorC (C:)
gyltqeeialllaaldgdnkkiailclstgarwgeaarlkaeniihnrvtfvktnkprtv
piseavakmiagflfpdadyprfrrtmkaikpdlpmgqathalrhsfathfminggsiit
lqrilghtrieqtmvyahfapeylqdaislnplrggte

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5dorD (D:)
tgyltqeeialllaaldgdnkkiailclstgarwgeaarlkaeniihnrvtfvktktnkp
rtvpiseavakmiadnkrgflfpdadyprfrrtmkaikpdlpmgqathalrhsfathfmi
nggsiitlqrilghtrieqtmvyahfapeylqdaislnplrggteaesvhtvstve

    Sequence, based on observed residues (ATOM records): (download) 
    >5dorD (D:)
gyltqeeialllaaldgdnkkiailclstgarwgeaarlkaeniihnrvtfvprtvpise
avakmiadgflfpdadyprfrrtmkaikpdlpmgqathalrhsfathfminggsiitlqr
ilghtrieqtmvyahfapeylqdaislnplrggteae