PDB entry 5dhv

View 5dhv on RCSB PDB site
Description: HIV-1 Rev NTD dimers with variable crossing angles
Class: immune system
Keywords: HIV, helical hairpin, RNA-binding, nuclear export, immune system
Deposited on 2015-08-31, released 2016-06-22
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-08-30, with a file datestamp of 2017-08-25.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Anti-Rev Antibody Fab single-chain variable fragment, heavy chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 5DHV (0-122)
    Domains in SCOPe 2.07: d5dhva1, d5dhva2
  • Chain 'B':
    Compound: Anti-Rev Antibody Fab single-chain variable fragment, light chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 5DHV (0-109)
    Domains in SCOPe 2.07: d5dhvb_
  • Chain 'H':
    Compound: Anti-Rev Antibody Fab single-chain variable fragment, heavy chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 5DHV (0-116)
    Domains in SCOPe 2.07: d5dhvh_
  • Chain 'L':
    Compound: Anti-Rev Antibody Fab single-chain variable fragment, light chain
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 5DHV (0-109)
    Domains in SCOPe 2.07: d5dhvl_
  • Chain 'M':
    Compound: Protein Rev
    Species: HUMAN IMMUNODEFICIENCY VIRUS 1 [TaxId:11676]
    Gene: rev
    Database cross-references and differences (RAF-indexed):
  • Chain 'N':
    Compound: Protein Rev
    Species: HUMAN IMMUNODEFICIENCY VIRUS 1 [TaxId:11676]
    Gene: rev
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5dhvA (A:)
    qeqlvesggrlvtpgtaltltckvsgfslsgfwlnwvrqapgkglewvgaiyrgsgsewy
    aswakgrftisdtsttvtlkltspttedtatyfcaadttdngyftiwgpgtlvtvsshhh
    hhh
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5dhvB (B:)
    elvmtqtpssvsepvggtvtikcqasqsisswlswyqqkpgqppklliydasnlasgvps
    rfmgsgsgteytltisgvqredaatyyclggypaasyrtafgggteleii
    

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5dhvH (H:)
    qeqlvesggrlvtpgtaltltckvsgfslsgfwlnwvrqapgkglewvgaiyrgsgsewy
    aswakgrftisdtsttvtlkltspttedtatyfcaadttdngyftiwgpgtlvtvss
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5dhvL (L:)
    elvmtqtpssvsepvggtvtikcqasqsisswlswyqqkpgqppklliydasnlasgvps
    rfmgsgsgteytltisgvqredaatyyclggypaasyrtafgggteleii
    

  • Chain 'M':
    No sequence available.

  • Chain 'N':
    No sequence available.