PDB entry 5db4

View 5db4 on RCSB PDB site
Description: Mycobacterium abscessus NadD in complex with Mg-ATP, space group I41
Class: transferase
Keywords: Rossman fold, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID, TRANSFERASE
Deposited on 2015-08-20, released 2016-08-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-20, with a file datestamp of 2017-09-15.
Experiment type: XRAY
Resolution: 2.28 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nicotinate-nucleotide adenylyltransferase
    Species: Mycobacterium abscessus [TaxId:561007]
    Gene: nadD, MAB_1621
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5db4a_
  • Chain 'B':
    Compound: nicotinate-nucleotide adenylyltransferase
    Species: Mycobacterium abscessus [TaxId:561007]
    Gene: nadD, MAB_1621
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5db4b_
  • Heterogens: ATP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5db4A (A:)
gpgsmvqserrrlgvmggtfdpihnghlvaasevadrfaldevifvptgqpwqkqgrkvs
paehrylmtviatasnprftvsradidrggatytvdtltdlrtahpdadlyfitgadala
silswenweqlftlakfigvsrpgyelssdhiahaelppdglslvevpalaisstdcrir
agqarpiwylvpdgvvqyvakhrlysgnkgnqggla

    Sequence, based on observed residues (ATOM records): (download) 
    >5db4A (A:)
rrrlgvmggtfdpihnghlvaasevadrfaldevifvptgqrkvspaehrylmtviatas
nprftvsradidrggatytvdtltdlrtahpdadlyfitgadalasilswenweqlftla
kfigvsrpgyelsglslvevpalaisstdcriragqarpiwylvpdgvvqyvakhrlys

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5db4B (B:)
gpgsmvqserrrlgvmggtfdpihnghlvaasevadrfaldevifvptgqpwqkqgrkvs
paehrylmtviatasnprftvsradidrggatytvdtltdlrtahpdadlyfitgadala
silswenweqlftlakfigvsrpgyelssdhiahaelppdglslvevpalaisstdcrir
agqarpiwylvpdgvvqyvakhrlysgnkgnqggla

    Sequence, based on observed residues (ATOM records): (download) 
    >5db4B (B:)
rrrlgvmggtfdpihnghlvaasevadrfaldevifvptgqrkvspaehrylmtviatas
nprftvsradidrggatytvdtltdlrtahpdadlyfitgadalaseqlftlakfigvsr
pgyelssdglslvevpalaisstdcriragqarpiwylvpdgvvqyvakhrlysg