PDB entry 5d4y

View 5d4y on RCSB PDB site
Description: A psychrophilic glycoside hydrolase family 10 endo-beta-1,4-xylanase
Class: hydrolase
Keywords: xylanase, GH10, TIM-barrel fold, HYDROLASE
Deposited on 2015-08-10, released 2016-02-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-02-24, with a file datestamp of 2016-02-19.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: xylanase
    Species: Capra hircus [TaxId:9925]
    Database cross-references and differences (RAF-indexed):
    • PDB 5D4Y
    Domains in SCOPe 2.07: d5d4ya_
  • Chain 'B':
    Compound: xylanase
    Species: Capra hircus [TaxId:9925]
    Database cross-references and differences (RAF-indexed):
    • PDB 5D4Y
    Domains in SCOPe 2.07: d5d4yb_
  • Heterogens: BXP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5d4yA (A:)
mahhhhhhvddddkmaqglkdaykdyfkigvavnnrnvadpdqikvvlrefnsitaenam
kpqptepkkgefnwedadkiadfcrangikmrghtlmwhsqigswmyqdekgnllskeef
yanmkhhiqaivnrykdvvycwdvvneavadspvypgrpelrnspmyqiageefiykafe
yaheadpdallfyndyndaepaksqriynlvkrmkdagvpidgigmqahynvygptmkev
ddaiklystvvdhihlteldirinedmggglrfnqgqatvsdwertlqqdqyvqlfkvlr
khkdvidcvtfwnvsdkdswlgvrnypllfdenykpkqaynavknfdpkmdnavi

    Sequence, based on observed residues (ATOM records): (download) 
    >5d4yA (A:)
qglkdaykdyfkigvavnnrnvadpdqikvvlrefnsitaenamkpqptepkkgefnwed
adkiadfcrangikmrghtlmwhsqigswmyqgnllskeefyanmkhhiqaivnrykdvv
ycwdvvneavadspvypgrpelrnspmyqiageefiykafeyaheadpdallfyndynda
epaksqriynlvkrmkdagvpidgigmqahynvygptmkevddaiklystvvdhihltel
dirinevsdwertlqqdqyvqlfkvlrkhkdvidcvtfwnvsdkdswlgvrnypllfden
ykpkqaynavknfd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5d4yB (B:)
mahhhhhhvddddkmaqglkdaykdyfkigvavnnrnvadpdqikvvlrefnsitaenam
kpqptepkkgefnwedadkiadfcrangikmrghtlmwhsqigswmyqdekgnllskeef
yanmkhhiqaivnrykdvvycwdvvneavadspvypgrpelrnspmyqiageefiykafe
yaheadpdallfyndyndaepaksqriynlvkrmkdagvpidgigmqahynvygptmkev
ddaiklystvvdhihlteldirinedmggglrfnqgqatvsdwertlqqdqyvqlfkvlr
khkdvidcvtfwnvsdkdswlgvrnypllfdenykpkqaynavknfdpkmdnavi

    Sequence, based on observed residues (ATOM records): (download) 
    >5d4yB (B:)
glkdaykdyfkigvavnnrnvadpdqikvvlrefnsitaenamkpqptepkkgefnweda
dkiadfcrangikmrghtlmwhsqigswmyqkgnllskeefyanmkhhiqaivnrykdvv
ycwdvvneavadspvypgrpelrnspmyqiageefiykafeyaheadpdallfyndynda
epaksqriynlvkrmkdagvpidgigmqahynvygptmkevddaiklystvvdhihltel
dirinvsdwertlqqdqyvqlfkvlrkhkdvidcvtfwnvsdkdswlgvrnypllfdeny
kpkqaynavknf