PDB entry 5d3d

View 5d3d on RCSB PDB site
Description: Crystal structure of Staphylococcal Superantigen-Like protein 3
Class: immune system
Keywords: Superantigens, Superantigen-like proteins, SSL, SSL3, Toll-Like Receptor 2, TLR2, Immunology, Inflammation, Inhibition, immune system
Deposited on 2015-08-06, released 2015-08-19
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-08-19, with a file datestamp of 2015-08-14.
Experiment type: XRAY
Resolution: 1.94 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Staphylococcal Superantigen-Like protein 3
    Species: Staphylococcus aureus (strain NCTC 8325) [TaxId:93061]
    Gene: SAOUHSC_00386
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d5d3da1, d5d3da2
  • Chain 'B':
    Compound: Staphylococcal Superantigen-Like protein 3
    Species: Staphylococcus aureus (strain NCTC 8325) [TaxId:93061]
    Gene: SAOUHSC_00386
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2G0X7 (2-194)
      • expression tag (0-1)
    Domains in SCOPe 2.05: d5d3db1, d5d3db2
  • Heterogens: CL, SCN, GOL, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5d3dA (A:)
gsmtpkyedlrayytkpsfefekqfgfmlkpwttvrfmnvipnrfiykialvgkdekkyk
dgpydnidvfivlednkyqlkkysvggitktnskkvnhkvelsitkkdnqgmisrdvsey
mitkeeislkeldfklrkqliekhnlygnmgsgtivikmknggkytfelhkklqehrmad
vidgtnidnievnik

    Sequence, based on observed residues (ATOM records): (download) 
    >5d3dA (A:)
kyedlrayytkpsfefekqfgfmlkpwttvrfmnvipnrfiykialvgkdekkykdgpyd
nidvfivlednkyqlkkysvggitktnskkvnhkvelsitkkdnqgmisrdvseymitke
eislkeldfklrkqliekhnlygnmgsgtivikmknggkytfelhkklqehrmadvidgt
nidnievnik

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5d3dB (B:)
gsmtpkyedlrayytkpsfefekqfgfmlkpwttvrfmnvipnrfiykialvgkdekkyk
dgpydnidvfivlednkyqlkkysvggitktnskkvnhkvelsitkkdnqgmisrdvsey
mitkeeislkeldfklrkqliekhnlygnmgsgtivikmknggkytfelhkklqehrmad
vidgtnidnievnik