PDB entry 5d28

View 5d28 on RCSB PDB site
Description: Complex of GM-CSF/IL-2 inhibition factor with Granulocyte-macrophage colony-stimulating factor
Class: viral protein
Keywords: Signaling Protein, Cytokine, Host-pathogen interactions, Immunology, viral protein
Deposited on 2015-08-05, released 2016-11-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: GM-CSF/IL-2 inhibition factor
    Species: Orf virus [TaxId:10258]
    Gene: GIF
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: granulocyte-macrophage colony-stimulating factor
    Species: Ovis aries [TaxId:9940]
    Gene: CSF2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5d28b_
  • Chain 'C':
    Compound: granulocyte-macrophage colony-stimulating factor
    Species: Ovis aries [TaxId:9940]
    Gene: CSF2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5d28c_
  • Chain 'D':
    Compound: GM-CSF/IL-2 inhibition factor
    Species: Orf virus [TaxId:10258]
    Gene: GIF
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5d28B (B:)
aptrqpspvtrpwqhvdaikealsllndstdtaavmdetvevvsemfdsqeptclqtrle
lykqglrgsltsltgsltmmashykkhcpptqetscetqiitfksfkenlkdflfiipfd
cwepvqk

    Sequence, based on observed residues (ATOM records): (download) 
    >5d28B (B:)
qhvdaikealsllndstdtaavmdetvevvsemfdsqeptclqtrlelykqglrgsltsl
tgsltmmashykkhcpptqetscetqiitfksfkenlkdflfiipfdcwep

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5d28C (C:)
aptrqpspvtrpwqhvdaikealsllndstdtaavmdetvevvsemfdsqeptclqtrle
lykqglrgsltsltgsltmmashykkhcpptqetscetqiitfksfkenlkdflfiipfd
cwepvqk

    Sequence, based on observed residues (ATOM records): (download) 
    >5d28C (C:)
qpspvtrpwqhvdaikealsllndstdtaavmdetvevvsemfdsqeptclqtrlelykq
glrgsltsltgsltmmashykkhcpptqetscetqiitfksfkenlkdflfiipfdcwep

  • Chain 'D':
    No sequence available.