PDB entry 5cy8

View 5cy8 on RCSB PDB site
Description: Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryze, in complex with fragment 244
Class: hydrolase/hydrolase inhibitor
Keywords: a peptide deformylase, Xanthomonas, fragment, metallopeptidase, HYDROLASE-HYDROLASE INHIBITOR complex
Deposited on 2015-07-30, released 2016-08-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-08-03, with a file datestamp of 2016-07-29.
Experiment type: XRAY
Resolution: 2.38 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide deformylase
    Species: Xanthomonas oryzae pv. oryzae KACC10331 [TaxId:291331]
    Gene: def, XOO1075
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5cy8a_
  • Heterogens: 56V, CD, ACT, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5cy8A (A:)
mirdiirmgdkrllrvapqvtnlgsaelhalvsdmfetmgaahgvglaapqiavdlqlmv
fgfeaserypeapavpltalanaqieplsdemengwegclsipglravipryryiryrgf
apdgspiereaegfharvvqheydhlvgrlypsrienfdtfgfddvlsydl

    Sequence, based on observed residues (ATOM records): (download) 
    >5cy8A (A:)
mirdiirmgdkrllrvapqvtnlgsaelhalvsdmfetmgaahgvglaapqiavdlqlmv
fgfeaserypeapavpltalanaqieplsdemengwegclsipglravipryryiryrgf
apdgspiereaegfharvvqheydhlvgrlypsrienfdtfgfddvlsyd