PDB entry 5cvp

View 5cvp on RCSB PDB site
Description: Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryze, in complex with fragment 571
Class: hydrolase/hydrolase inhibitor
Keywords: peptide deformylase, Xanthomonas, Fragment, metallopeptidase, HYDROLASE-HYDROLASE INHIBITOR complex
Deposited on 2015-07-27, released 2016-08-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-08-03, with a file datestamp of 2016-07-29.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide deformylase
    Species: Xanthomonas oryzae pv. oryzae KACC10331 [TaxId:291331]
    Gene: def, XOO1075
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5cvpa_
  • Heterogens: CD, ACT, NA, 56F, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5cvpA (A:)
mirdiirmgdkrllrvapqvtnlgsaelhalvsdmfetmgaahgvglaapqiavdlqlmv
fgfeaserypeapavpltalanaqieplsdemengwegclsipglravipryryiryrgf
apdgspiereaegfharvvqheydhlvgrlypsrienfdtfgfddvlsydl

    Sequence, based on observed residues (ATOM records): (download) 
    >5cvpA (A:)
mirdiirmgdkrllrvapqvtnlgsaelhalvsdmfetmgaahgvglaapqiavdlqlmv
fgfeaeapavpltalanaqieplsdemengwegclsipglravipryryiryrgfapdgs
piereaegfharvvqheydhlvgrlypsrienfdtfgfddvlsydl