PDB entry 5cqh

View 5cqh on RCSB PDB site
Description: Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B
Class: hydrolase
Keywords: APOBEC, deaminase, HYDROLASE
Deposited on 2015-07-21, released 2015-10-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-25, with a file datestamp of 2019-12-20.
Experiment type: XRAY
Resolution: 1.73 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA dC-dU-editing enzyme APOBEC-3B
    Species: Homo sapiens [TaxId:9606]
    Gene: APOBEC3B
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UH17 (Start-184)
      • conflict (14)
      • conflict (42)
      • conflict (44)
      • conflict (56)
      • conflict (114)
      • expression tag (185)
    Domains in SCOPe 2.08: d5cqha1, d5cqha2
  • Heterogens: ZN, DC, CL, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5cqhA (A:)
meilrylmdpdtftsnfnndplvlrrrqtylcyeverldngtsvkmdqhmgflcnesgrh
aelrfldlvpslqldpaqiyrvtwfiswspcfswgcagevraflqenthvrlrikaariy
dydplykealqmlrdagaqvsimtydefeycwdtfvyrqgcpfqpwdgleehsqalsgrl
railql

    Sequence, based on observed residues (ATOM records): (download) 
    >5cqhA (A:)
lrylmdpdtftsnfnndplvlrrrqtylcyeverldngtsvkmdqhmgflcnesgrhael
rfldlvpslqldpaqiyrvtwfiswspcfswgcagevraflqenthvrlrikaariydyd
plykealqmlrdagaqvsimtydefeycwdtfvyrqgcpfqpwdgleehsqalsgrlrai
lql