PDB entry 5cp7

View 5cp7 on RCSB PDB site
Description: Crystal Structure of an Antigen-Binding Fragment of Monoclonal Antibody against Sulfonamides
Class: immune system
Keywords: Antigen-Binding Fragment, Anti-Sulfonamides Antibody, IMMUNE SYSTEM
Deposited on 2015-07-21, released 2015-08-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-02-13, with a file datestamp of 2019-02-08.
Experiment type: XRAY
Resolution: 3.01 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Light Chain of Antigen-Binding Fragment of Monoclonal Antibody of 4C7
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5CP7 (0-217)
    Domains in SCOPe 2.08: d5cp7a1, d5cp7a2
  • Chain 'B':
    Compound: Heavy Chain of Antigen-Binding Fragment of Monoclonal Antibody of 4C7
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5CP7 (0-213)
    Domains in SCOPe 2.08: d5cp7b_
  • Chain 'C':
    Compound: Light Chain of Antigen-Binding Fragment of Monoclonal Antibody of 4C7
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5CP7 (0-217)
    Domains in SCOPe 2.08: d5cp7c1, d5cp7c2
  • Chain 'D':
    Compound: Heavy Chain of Antigen-Binding Fragment of Monoclonal Antibody of 4C7
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5CP7
    Domains in SCOPe 2.08: d5cp7d_
  • Chain 'E':
    Compound: Light Chain of Antigen-Binding Fragment of Monoclonal Antibody of 4C7
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5CP7 (0-217)
    Domains in SCOPe 2.08: d5cp7e1, d5cp7e2
  • Chain 'F':
    Compound: Heavy Chain of Antigen-Binding Fragment of Monoclonal Antibody of 4C7
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5CP7
    Domains in SCOPe 2.08: d5cp7f_
  • Chain 'G':
    Compound: Light Chain of Antigen-Binding Fragment of Monoclonal Antibody of 4C7
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5CP7 (0-217)
    Domains in SCOPe 2.08: d5cp7g1, d5cp7g2
  • Chain 'H':
    Compound: Heavy Chain of Antigen-Binding Fragment of Monoclonal Antibody of 4C7
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 5CP7 (0-End)
    Domains in SCOPe 2.08: d5cp7h_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5cp7A (A:)
dvvmtqtpitlsvtigqpasisckssqslldsdgktylnwllqrpgqspkrliylvskld
srvpdrftgsgagtdftlkisrveaedlgiyycwqgthfpqtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnsetdqdskdstysm
sstltltkdeyerhntytceathktstspivksfnrne

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5cp7B (B:)
dvqlresgpdlvtpsqslsltctvtgysitsgyswhwnrqfpgnklewmgyihysgstny
npslrgrisitrdtsknqfflqlnsvttedtatyycaryggywgqgtsvtvssakttpps
vyplapgggatnsmvtlgclvkgyfpepvtvtwnsgslsggvhtfpavlqsdlytlsssv
tvpsstwpsetvtcnvahpasstkvdkkivprae

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5cp7C (C:)
dvvmtqtpitlsvtigqpasisckssqslldsdgktylnwllqrpgqspkrliylvskld
srvpdrftgsgagtdftlkisrveaedlgiyycwqgthfpqtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnsetdqdskdstysm
sstltltkdeyerhntytceathktstspivksfnrne

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5cp7D (D:)
dvqlresgpdlvtpsqslsltctvtgysitsgyswhwnrqfpgnklewmgyihysgstny
npslrgrisitrdtsknqfflqlnsvttedtatyycaryggywgqgtsvtvssakttpps
vyplapgggatnsmvtlgclvkgyfpepvtvtwnsgslsggvhtfpavlqsdlytlsssv
tvpsstwpsetvtcnvahpasstkvdkkivprae

    Sequence, based on observed residues (ATOM records): (download) 
    >5cp7D (D:)
vqlresgpdlvtpsqslsltctvtgysitsgyswhwnrqfpgnklewmgyihysgstnyn
pslrgrisitrdtsknqfflqlnsvttedtatyycaryggywgqgtsvtvssakttppsv
yplapmvtlgclvkgyfpepvtvtwnsgslsggvhtfpavlqsdlytlsssvtvpsstwp
setvtcnvahpasstkvdkkivpr

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5cp7E (E:)
dvvmtqtpitlsvtigqpasisckssqslldsdgktylnwllqrpgqspkrliylvskld
srvpdrftgsgagtdftlkisrveaedlgiyycwqgthfpqtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnsetdqdskdstysm
sstltltkdeyerhntytceathktstspivksfnrne

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5cp7F (F:)
dvqlresgpdlvtpsqslsltctvtgysitsgyswhwnrqfpgnklewmgyihysgstny
npslrgrisitrdtsknqfflqlnsvttedtatyycaryggywgqgtsvtvssakttpps
vyplapgggatnsmvtlgclvkgyfpepvtvtwnsgslsggvhtfpavlqsdlytlsssv
tvpsstwpsetvtcnvahpasstkvdkkivprae

    Sequence, based on observed residues (ATOM records): (download) 
    >5cp7F (F:)
lresgpdlvtpsqslsltctvtgysitsgyswhwnrqfpgnklewmgyihysgstnynps
lrgrisitrdtsknqfflqlnsvttedtatyycaryggywgqgtsvtvssakttppsvyp
lapgatnsmvtlgclvkgyfpepvtvtwnsgslsggvhtfpavlqsdlytlsssvtvpss
twpsetvtcnvahpasstkvdkkivpr

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5cp7G (G:)
dvvmtqtpitlsvtigqpasisckssqslldsdgktylnwllqrpgqspkrliylvskld
srvpdrftgsgagtdftlkisrveaedlgiyycwqgthfpqtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnsetdqdskdstysm
sstltltkdeyerhntytceathktstspivksfnrne

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >5cp7H (H:)
dvqlresgpdlvtpsqslsltctvtgysitsgyswhwnrqfpgnklewmgyihysgstny
npslrgrisitrdtsknqfflqlnsvttedtatyycaryggywgqgtsvtvssakttpps
vyplapgggatnsmvtlgclvkgyfpepvtvtwnsgslsggvhtfpavlqsdlytlsssv
tvpsstwpsetvtcnvahpasstkvdkkivprae

    Sequence, based on observed residues (ATOM records): (download) 
    >5cp7H (H:)
dvqlresgpdlvtpsqslsltctvtgysitsgyswhwnrqfpgnklewmgyihysgstny
npslrgrisitrdtsknqfflqlnsvttedtatyycaryggywgqgtsvtvssakttpps
vyplapgggatnsmvtlgclvkgyfpepvtvtwnsgslsggvhtfpavlqsdlytlsssv
tvpsstwpsetvtcnvahpasstkvdkkivpr