PDB entry 5ce3

View 5ce3 on RCSB PDB site
Description: The Yersinia YopO - actin complex with MgADP
Class: contractile protein/transferase
Keywords: Kinase cytoskeleton Pathogen host, CONTRACTILE PROTEIN-TRANSFERASE complex
Deposited on 2015-07-06, released 2016-07-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-05, with a file datestamp of 2020-01-31.
Experiment type: XRAY
Resolution: 2.93 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: actin
    Species: Spodoptera frugiperda [TaxId:7108]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ce3a1, d5ce3a2
  • Chain 'B':
    Compound: protein kinase yopo
    Species: Yersinia enterocolitica [TaxId:630]
    Gene: yopO
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q93KQ6 (Start-642)
      • engineered mutation (118-120)
      • engineered mutation (353-354)
  • Chain 'C':
    Compound: actin
    Species: Spodoptera frugiperda [TaxId:7108]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ce3c1, d5ce3c2
  • Chain 'D':
    Compound: protein kinase yopo
    Species: Yersinia enterocolitica [TaxId:630]
    Gene: yopO
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q93KQ6 (Start-642)
      • engineered mutation (118-120)
      • engineered mutation (353-354)
  • Heterogens: ATP, CA, ADP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5ce3A (A:)
    mcdddvaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdeaq
    skrgiltlkypiehgiitnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekm
    tqimfetfnspamhvaiqavlslyasgrttgivldsgdgvshtvpiyegyalphailrld
    lagrdltdylmkiltergysftttaereivrdikeklcyvaldfeqemataaastsleks
    yelpdgqviaignerfrcpealfqpsflgmescgihetvynsimkcdvdirkdlyantvm
    sggttmypgiadrmqkeitalapstiktkiiapperkysvwiggsilaslstfqqmwisk
    eeydesgpgivhrkcf
    

    Sequence, based on observed residues (ATOM records): (download)
    >5ce3A (A:)
    vaalvvdngsgmckagfagddapravfpsivgrprsyvgdeaqskrgiltlkypiehgii
    tnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekmtqimfetfnspamhvai
    qavlslyasgrttgivldsgdgvshtvpiyegyalphailrldlagrdltdylmkilter
    gysftttaereivrdikeklcyvaldfeqemataaastsleksyelpdgqviaignerfr
    cpealfqpsflgmescgihetvynsimkcdvdirkdlyantvmsggttmypgiadrmqke
    italapstiktkiiapperkysvwiggsilaslstfqqmwiskeeydesgpgivhrkc
    

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >5ce3C (C:)
    mcdddvaalvvdngsgmckagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdeaq
    skrgiltlkypiehgiitnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekm
    tqimfetfnspamhvaiqavlslyasgrttgivldsgdgvshtvpiyegyalphailrld
    lagrdltdylmkiltergysftttaereivrdikeklcyvaldfeqemataaastsleks
    yelpdgqviaignerfrcpealfqpsflgmescgihetvynsimkcdvdirkdlyantvm
    sggttmypgiadrmqkeitalapstiktkiiapperkysvwiggsilaslstfqqmwisk
    eeydesgpgivhrkcf
    

    Sequence, based on observed residues (ATOM records): (download)
    >5ce3C (C:)
    vaalvvdngsgmckagfagddapravfpsivgrprsyvgdeaqskrgiltlkypiehgii
    tnwddmekiwhhtfynelrvapeehpvllteaplnpkanrekmtqimfetfnspamhvai
    qavlslyasgrttgivldsgdgvshtvpiyegyalphailrldlagrdltdylmkilter
    gysftttaereivrdikeklcyvaldfeqemataaastsleksyelpdgqviaignerfr
    cpealfqpsflgmescgihetvynsimkcdvdirkdlyantvmsggttmypgiadrmqke
    italapstiktkiiapperkysvwiggsilaslstfqqmwiskeeydesgpgivhrkc
    

  • Chain 'D':
    No sequence available.