PDB entry 5ccj
View 5ccj on RCSB PDB site
Description: Crystal structure of the quintuple mutant of the synaptotagmin-1 C2B domain
Class: signaling protein
Keywords: Synaptotagmin1, C2B domain, SIGNALING PROTEIN
Deposited on
2015-07-02, released
2015-08-12
The last revision prior to the SCOPe 2.08 freeze date was dated
2015-09-16, with a file datestamp of
2015-09-11.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Synaptotagmin-1
Species: Rattus norvegicus [TaxId:10116]
Gene: Syt1
Database cross-references and differences (RAF-indexed):
- Uniprot P21707 (1-End)
- engineered mutation (11)
- engineered mutation (25)
- engineered mutation (68)
- engineered mutation (128-129)
Domains in SCOPe 2.08: d5ccja_ - Chain 'B':
Compound: Synaptotagmin-1
Species: Rattus norvegicus [TaxId:10116]
Gene: Syt1
Database cross-references and differences (RAF-indexed):
- Uniprot P21707 (1-151)
- engineered mutation (11)
- engineered mutation (25)
- engineered mutation (68)
- engineered mutation (128-129)
Domains in SCOPe 2.08: d5ccjb_ - Chain 'C':
Compound: Synaptotagmin-1
Species: Rattus norvegicus [TaxId:10116]
Gene: Syt1
Database cross-references and differences (RAF-indexed):
- Uniprot P21707 (1-End)
- engineered mutation (11)
- engineered mutation (25)
- engineered mutation (68)
- engineered mutation (128-129)
Domains in SCOPe 2.08: d5ccjc_ - Chain 'D':
Compound: Synaptotagmin-1
Species: Rattus norvegicus [TaxId:10116]
Gene: Syt1
Database cross-references and differences (RAF-indexed):
- Uniprot P21707 (1-151)
- expression tag (0)
- engineered mutation (11)
- engineered mutation (25)
- engineered mutation (68)
- engineered mutation (128-129)
Domains in SCOPe 2.08: d5ccjd1, d5ccjd2 - Heterogens: GOL, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5ccjA (A:)
seklgdicfslayvptagkltvvilaaknlkkmdvgglsdpyvkihlmqngkrlkkkktt
ikkntlnpwynesfsfevpfeqiqkvqvvvtvldydkigkndaigkvfvgynstgaelrh
wsdmlanpaapiaqwhtlqveeevdamlavkk
Sequence, based on observed residues (ATOM records): (download)
>5ccjA (A:)
eklgdicfslayvptagkltvvilaaknlkkmdvgglsdpyvkihlmqngkrlkkkktti
kkntlnpwynesfsfevpfeqiqkvqvvvtvldydkigkndaigkvfvgynstgaelrhw
sdmlanpaapiaqwhtlqveeevdamla
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5ccjB (B:)
seklgdicfslayvptagkltvvilaaknlkkmdvgglsdpyvkihlmqngkrlkkkktt
ikkntlnpwynesfsfevpfeqiqkvqvvvtvldydkigkndaigkvfvgynstgaelrh
wsdmlanpaapiaqwhtlqveeevdamlavkk
Sequence, based on observed residues (ATOM records): (download)
>5ccjB (B:)
eklgdicfslayvptagkltvvilaaknlkkmdvgglsdpyvkihlmqngkrlkkkktti
kkntlnpwynesfsfevpfeqiqkvqvvvtvldydkigkndaigkvfvgynstgaelrhw
sdmlanpaapiaqwhtlqveeevdamlavkk
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5ccjC (C:)
seklgdicfslayvptagkltvvilaaknlkkmdvgglsdpyvkihlmqngkrlkkkktt
ikkntlnpwynesfsfevpfeqiqkvqvvvtvldydkigkndaigkvfvgynstgaelrh
wsdmlanpaapiaqwhtlqveeevdamlavkk
Sequence, based on observed residues (ATOM records): (download)
>5ccjC (C:)
eklgdicfslayvptagkltvvilaaknlkkmdvgglsdpyvkihlmqngkrlkkkktti
kkntlnpwynesfsfevpfeqiqkvqvvvtvldydkigkndaigkvfvgynstgaelrhw
sdmlanpaapiaqwhtlqveeevdamla
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>5ccjD (D:)
seklgdicfslayvptagkltvvilaaknlkkmdvgglsdpyvkihlmqngkrlkkkktt
ikkntlnpwynesfsfevpfeqiqkvqvvvtvldydkigkndaigkvfvgynstgaelrh
wsdmlanpaapiaqwhtlqveeevdamlavkk