SCOPe 2.08: Structural Classification of Proteins

PDB entry 5c6f

View 5c6f on RCSB PDB site
Description: Crystal structures of ferritin mutants reveal side-on binding to diiron and end-on cleavage of oxygen
Class: oxidoreductase
Keywords: ferritin, mutant, ferroxidase center, novel iron uptake route, cleavage of oxygen, OXIDOREDUCTASE
Deposited on 2015-06-23, released 2016-07-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-19, with a file datestamp of 2020-02-14.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fa1, d5c6fa2
Chain 'B':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fb1, d5c6fb2
Chain 'C':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fc1, d5c6fc2
Chain 'D':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fd1, d5c6fd2
Chain 'E':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fe1, d5c6fe2
Chain 'F':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6ff1, d5c6ff2
Chain 'G':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fg1, d5c6fg2
Chain 'H':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fh1, d5c6fh2
Chain 'I':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fi1, d5c6fi2
Chain 'J':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fj1, d5c6fj2
Chain 'K':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fk1, d5c6fk2
Chain 'L':
Compound: Bacterial non-heme ferritin
Species: Helicobacter pylori [TaxId:85963]
Gene: ftnA, pfr, jhp_0598
Database cross-references and differences (RAF-indexed):
- Uniprot Q9ZLI1 (6-End)
  - expression tag (0-5)
  - engineered mutation (98)
Domains in SCOPe 2.08: d5c6fl1, d5c6fl2
Heterogens: FE, IMD, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>5c6fA (A:)
hhsqdpmlskdiikllneqvnkemnssnlymsmsswcythsldgaglflfdhaaeeyeha
kkliiflnennvpvqltsisapehkfegltqifqkayeleqhisesinnivdhaikskdh
atfnflqwyvaeqheeevlfkdildkielignenhglyladqyvkgiaksrks