PDB entry 5bxq

View 5bxq on RCSB PDB site
Description: Structure of the NTF2:RanGDP complex
Class: transport protein
Keywords: Nuclear transport, RanGDP, NTF2, transport protein
Deposited on 2015-06-09, released 2015-07-01
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-07-01, with a file datestamp of 2015-06-26.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nuclear transport factor 2
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Nutf2, Ntf2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5bxqa_
  • Chain 'B':
    Compound: nuclear transport factor 2
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Nutf2, Ntf2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5bxqb_
  • Chain 'C':
    Compound: GTP-binding nuclear protein ran
    Species: CANIS FAMILIARIS [TaxId:9615]
    Gene: RAN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5bxqc_
  • Chain 'D':
    Compound: GTP-binding nuclear protein ran
    Species: CANIS FAMILIARIS [TaxId:9615]
    Gene: RAN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5bxqd_
  • Chain 'E':
    Compound: GTP-binding nuclear protein ran
    Species: CANIS FAMILIARIS [TaxId:9615]
    Gene: RAN
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5bxqe_
  • Heterogens: GDP, MG, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5bxqA (A:)
    mgdkpiweqigssfiqhyyqlfdndrtqlgaiyidascltwegqqfqgkaaiveklsslp
    fqkiqhsitaqdhqptpdsciismvvgqlkadedpimgfhqmfllknindawvctndmfr
    lalhnfg
    

    Sequence, based on observed residues (ATOM records): (download)
    >5bxqA (A:)
    kpiweqigssfiqhyyqlfdndrtqlgaiyidascltwegqqfqgkaaiveklsslpfqk
    iqhsitaqdhqptpdsciismvvgqlkadedpimgfhqmfllknindawvctndmfrlal
    hnfg
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5bxqB (B:)
    mgdkpiweqigssfiqhyyqlfdndrtqlgaiyidascltwegqqfqgkaaiveklsslp
    fqkiqhsitaqdhqptpdsciismvvgqlkadedpimgfhqmfllknindawvctndmfr
    lalhnfg
    

    Sequence, based on observed residues (ATOM records): (download)
    >5bxqB (B:)
    kpiweqigssfiqhyyqlfdndrtqlgaiyidascltwegqqfqgkaaiveklsslpfqk
    iqhsitaqdhqptpdsciismvvgqlkadedpimgfhqmfllknindawvctndmfrlal
    hnfg
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >5bxqC (C:)
    maaqgepqvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpik
    fnvwdtagqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlc
    gnkvdikdrkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvamp
    alappevvmdpalaaqyehdlevaqttalpdedddl
    

    Sequence, based on observed residues (ATOM records): (download)
    >5bxqC (C:)
    qvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpikfnvwdta
    gqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlcgnkvdik
    drkvkaksivnlqyydisaksnynfekpflwlarkligdpnlefvampalappevvmdpa
    laaqyehdleva
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >5bxqD (D:)
    maaqgepqvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpik
    fnvwdtagqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlc
    gnkvdikdrkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvamp
    alappevvmdpalaaqyehdlevaqttalpdedddl
    

    Sequence, based on observed residues (ATOM records): (download)
    >5bxqD (D:)
    pqvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpikfnvwdt
    agqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlcgnkvdi
    kdrkvkaksivfnlqyydisaksnynfekpflwlarkligdpnlefvampalappevvmd
    palaaqyehdlevaqtta
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >5bxqE (E:)
    maaqgepqvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpik
    fnvwdtagqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlc
    gnkvdikdrkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvamp
    alappevvmdpalaaqyehdlevaqttalpdedddl
    

    Sequence, based on observed residues (ATOM records): (download)
    >5bxqE (E:)
    qvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpikfnvwdta
    gqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlcgnkvdik
    drkvkaksivfhrnlqyydisaksnynfekpflwlarkligdpnlefvampalappevvm
    dpalaaqyehdlevaqttalpde