PDB entry 5bxq
View 5bxq on RCSB PDB site
Description: Structure of the NTF2:RanGDP complex
Class: transport protein
Keywords: Nuclear transport, RanGDP, NTF2, transport protein
Deposited on
2015-06-09, released
2015-07-01
The last revision prior to the SCOPe 2.05 freeze date was dated
2015-07-01, with a file datestamp of
2015-06-26.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: nuclear transport factor 2
Species: Rattus norvegicus [TaxId:10116]
Gene: Nutf2, Ntf2
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d5bxqa_ - Chain 'B':
Compound: nuclear transport factor 2
Species: Rattus norvegicus [TaxId:10116]
Gene: Nutf2, Ntf2
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d5bxqb_ - Chain 'C':
Compound: GTP-binding nuclear protein ran
Species: CANIS FAMILIARIS [TaxId:9615]
Gene: RAN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d5bxqc_ - Chain 'D':
Compound: GTP-binding nuclear protein ran
Species: CANIS FAMILIARIS [TaxId:9615]
Gene: RAN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d5bxqd_ - Chain 'E':
Compound: GTP-binding nuclear protein ran
Species: CANIS FAMILIARIS [TaxId:9615]
Gene: RAN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d5bxqe_ - Heterogens: GDP, MG, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5bxqA (A:)
mgdkpiweqigssfiqhyyqlfdndrtqlgaiyidascltwegqqfqgkaaiveklsslp
fqkiqhsitaqdhqptpdsciismvvgqlkadedpimgfhqmfllknindawvctndmfr
lalhnfg
Sequence, based on observed residues (ATOM records): (download)
>5bxqA (A:)
kpiweqigssfiqhyyqlfdndrtqlgaiyidascltwegqqfqgkaaiveklsslpfqk
iqhsitaqdhqptpdsciismvvgqlkadedpimgfhqmfllknindawvctndmfrlal
hnfg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5bxqB (B:)
mgdkpiweqigssfiqhyyqlfdndrtqlgaiyidascltwegqqfqgkaaiveklsslp
fqkiqhsitaqdhqptpdsciismvvgqlkadedpimgfhqmfllknindawvctndmfr
lalhnfg
Sequence, based on observed residues (ATOM records): (download)
>5bxqB (B:)
kpiweqigssfiqhyyqlfdndrtqlgaiyidascltwegqqfqgkaaiveklsslpfqk
iqhsitaqdhqptpdsciismvvgqlkadedpimgfhqmfllknindawvctndmfrlal
hnfg
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5bxqC (C:)
maaqgepqvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpik
fnvwdtagqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlc
gnkvdikdrkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvamp
alappevvmdpalaaqyehdlevaqttalpdedddl
Sequence, based on observed residues (ATOM records): (download)
>5bxqC (C:)
qvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpikfnvwdta
gqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlcgnkvdik
drkvkaksivnlqyydisaksnynfekpflwlarkligdpnlefvampalappevvmdpa
laaqyehdleva
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5bxqD (D:)
maaqgepqvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpik
fnvwdtagqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlc
gnkvdikdrkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvamp
alappevvmdpalaaqyehdlevaqttalpdedddl
Sequence, based on observed residues (ATOM records): (download)
>5bxqD (D:)
pqvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpikfnvwdt
agqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlcgnkvdi
kdrkvkaksivfnlqyydisaksnynfekpflwlarkligdpnlefvampalappevvmd
palaaqyehdlevaqtta
- Chain 'E':
Sequence, based on SEQRES records: (download)
>5bxqE (E:)
maaqgepqvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpik
fnvwdtagqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlc
gnkvdikdrkvkaksivfhrkknlqyydisaksnynfekpflwlarkligdpnlefvamp
alappevvmdpalaaqyehdlevaqttalpdedddl
Sequence, based on observed residues (ATOM records): (download)
>5bxqE (E:)
qvqfklvlvgdggtgkttfvkrhltgefekkyvatlgvevhplvfhtnrgpikfnvwdta
gqekfgglrdgyyiqaqcaiimfdvtsrvtyknvpnwhrdlvrvcenipivlcgnkvdik
drkvkaksivfhrnlqyydisaksnynfekpflwlarkligdpnlefvampalappevvm
dpalaaqyehdlevaqttalpde