PDB entry 5bs6

View 5bs6 on RCSB PDB site
Description: apo structure of transcriptional factor arar from bacteroides thetaiotaomicron vpi
Deposited on 2015-06-01, released 2015-06-17
The last revision was dated 2015-12-16, with a file datestamp of 2015-12-11.
No data on structure quality are available

Chains and heterogens:

  • Chain 'A':
    Compound: transcriptional regulator AraR
    Species: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) [TaxId:226186]
    Gene: BT_0354
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: transcriptional regulator AraR
    Species: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) [TaxId:226186]
    Gene: BT_0354
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8AAV8 (3-227)
      • expression tag (2)
  • Chain 'C':
    Compound: transcriptional regulator AraR
    Species: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) [TaxId:226186]
    Gene: BT_0354
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8AAV8 (3-227)
      • expression tag (2)
  • Chain 'D':
    Compound: transcriptional regulator AraR
    Species: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) [TaxId:226186]
    Gene: BT_0354
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8AAV8 (3-227)
      • expression tag (0-2)
  • Heterogens: EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOP 1.73, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >5bs6A (A:)
snamknyyssnptfylgidciifgfnegeisllllkrnfepamgewslmggfvqkdesvd
daakrvlaeltglenvymeqvgafgaidrdpgervvsiayyalinineydrelvqkhnay
wvninelpalifdhpemvdkaremmkqkasvepigfnllpklftlsqlqslyeaiygepm
dkrnfrkrvaemdfiektdkidklgskrgaalykfngkayrkdpkfkl

    Sequence, based on observed residues (ATOM records):
    >5bs6A (A:)
nyyssnptfylgidciifgfnegeisllllkrnfepamgewslmggfvqkdesvddaakr
vlaeltglenvymeqvgafgaidrdpgervvsiayyalinineydrelvqkhnaywvnin
elpalifdhpemvdkaremmkqkasvepigfnllpklftlsqlqslyeaiygepmdkrnf
rkrvaemdfiektdkidklgskrgaalykfngkayrkdpkfkl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >5bs6B (B:)
snamknyyssnptfylgidciifgfnegeisllllkrnfepamgewslmggfvqkdesvd
daakrvlaeltglenvymeqvgafgaidrdpgervvsiayyalinineydrelvqkhnay
wvninelpalifdhpemvdkaremmkqkasvepigfnllpklftlsqlqslyeaiygepm
dkrnfrkrvaemdfiektdkidklgskrgaalykfngkayrkdpkfkl

    Sequence, based on observed residues (ATOM records):
    >5bs6B (B:)
amknyyssnptfylgidciifgfnegeisllllkrnfepamgewslmggfvqkdesvdda
akrvlaeltglenvymeqvgafgaidrdpgervvsiayyalinineydrelvqkhnaywv
ninelpalifdhpemvdkaremmkqkasvepigfnllpklftlsqlqslyeaiygepmdk
rnfrkrvaemdfiektdkidklgskrgaalykfngkayrkdpfkl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >5bs6C (C:)
snamknyyssnptfylgidciifgfnegeisllllkrnfepamgewslmggfvqkdesvd
daakrvlaeltglenvymeqvgafgaidrdpgervvsiayyalinineydrelvqkhnay
wvninelpalifdhpemvdkaremmkqkasvepigfnllpklftlsqlqslyeaiygepm
dkrnfrkrvaemdfiektdkidklgskrgaalykfngkayrkdpkfkl

    Sequence, based on observed residues (ATOM records):
    >5bs6C (C:)
amknyyssnptfylgidciifgfnegeisllllkrnfepamgewslmggfvqkdesvdda
akrvlaeltglenvymeqvgafgaidrdpgervvsiayyalinineydrelvqkhnaywv
ninelpalifdhpemvdkaremmkqkasvepigfnllpklftlsqlqslyeaiygepmdk
rnfrkrvaemdfiektdkidklgskrgaalykfngkayrkdpkfkl

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >5bs6D (D:)
snamknyyssnptfylgidciifgfnegeisllllkrnfepamgewslmggfvqkdesvd
daakrvlaeltglenvymeqvgafgaidrdpgervvsiayyalinineydrelvqkhnay
wvninelpalifdhpemvdkaremmkqkasvepigfnllpklftlsqlqslyeaiygepm
dkrnfrkrvaemdfiektdkidklgskrgaalykfngkayrkdpkfkl