PDB entry 5b6j

View 5b6j on RCSB PDB site
Description: Crystal structure of Peptidyl-tRNA hydrolase mutant -H24N from Vibrio cholerae
Class: hydrolase
Keywords: Peptidyl-tRNA hydrolase, Mutant H24N, HYDROLASE
Deposited on 2016-05-30, released 2017-04-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-04-12, with a file datestamp of 2017-04-07.
Experiment type: XRAY
Resolution: 2.43 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptidyl-tRNA hydrolase
    Species: Vibrio cholerae [TaxId:345073]
    Gene: pth, VC0395_A1761, VC395_2298
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5F686 (Start-198)
      • insertion (3)
      • engineered mutation (25)
    Domains in SCOPe 2.08: d5b6ja_
  • Chain 'B':
    Compound: Peptidyl-tRNA hydrolase
    Species: Vibrio cholerae [TaxId:345073]
    Gene: pth, VC0395_A1761, VC395_2298
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5F686 (Start-198)
      • insertion (3)
      • engineered mutation (25)
    Domains in SCOPe 2.08: d5b6jb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5b6jA (A:)
gamvsqpikllvglanpgpeyaktrnnagawvveelarihnvtlknepkffgltgrllin
sqelrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghn
glkdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqecldaavdesvrclei
lmkdgltkaqnrlhtfkae

    Sequence, based on observed residues (ATOM records): (download) 
    >5b6jA (A:)
vsqpikllvglanpgpeyaktrnnagawvveelarihnvtlknepkffgltgrllinsqe
lrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghnglk
dtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqecldaavdesvrcleilmk
dgltkaqnrlhtfkae

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5b6jB (B:)
gamvsqpikllvglanpgpeyaktrnnagawvveelarihnvtlknepkffgltgrllin
sqelrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghn
glkdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqecldaavdesvrclei
lmkdgltkaqnrlhtfkae

    Sequence, based on observed residues (ATOM records): (download) 
    >5b6jB (B:)
vsqpikllvglanpgpeyaktrnnagawvveelarihnvtlknepkffgltgrllinsqe
lrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghnglk
dtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqecldaavdesvrcleilmk
dgltkaqnrlhtfkae