PDB entry 5b61

View 5b61 on RCSB PDB site
Description: Extra-superfolder GFP
Class: fluorescent protein
Keywords: GFP, Random mutagenesis, Folding robustness, FLUORESCENT PROTEIN
Deposited on 2016-05-24, released 2017-06-14
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-06-14, with a file datestamp of 2017-06-09.
Experiment type: XRAY
Resolution: 3.12 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • PDB 5B61
    Domains in SCOPe 2.06: d5b61a_
  • Chain 'B':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • PDB 5B61
    Domains in SCOPe 2.06: d5b61b_
  • Chain 'C':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • PDB 5B61
    Domains in SCOPe 2.06: d5b61c_
  • Chain 'D':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • PDB 5B61
    Domains in SCOPe 2.06: d5b61d_
  • Chain 'E':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • PDB 5B61
    Domains in SCOPe 2.06: d5b61e_
  • Chain 'F':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • PDB 5B61
    Domains in SCOPe 2.06: d5b61f_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5b61A (A:)
mskgeelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptl
vttcgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtiv
nriklkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqlad
hyqqntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >5b61A (A:)
ftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptlvttcgyg
vqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtivnriklkg
idfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqladhyqqntp
igdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5b61B (B:)
mskgeelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptl
vttcgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtiv
nriklkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqlad
hyqqntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >5b61B (B:)
lftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptlvttcgy
gvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtivnriklk
gidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqladhyqqnt
pigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagit

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5b61C (C:)
mskgeelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptl
vttcgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtiv
nriklkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqlad
hyqqntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >5b61C (C:)
geelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptlvtt
cgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtivnri
klkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqladhyq
qntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagi

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5b61D (D:)
mskgeelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptl
vttcgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtiv
nriklkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqlad
hyqqntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >5b61D (D:)
geelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptlvtt
cgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtivnri
klkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqladhyq
qntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagit

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5b61E (E:)
mskgeelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptl
vttcgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtiv
nriklkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqlad
hyqqntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >5b61E (E:)
geelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptlvtt
cgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtivnri
klkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqladhyq
qntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagit

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5b61F (F:)
mskgeelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptl
vttcgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtiv
nriklkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqlad
hyqqntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvtaagithgmdelyk

    Sequence, based on observed residues (ATOM records): (download) 
    >5b61F (F:)
geelftgvvpilveldgdvnghkfsvrgegegdatngkitlklicttgklpvpwptlvtt
cgygvqcfarypdhmkrhdffksampegyvqertisfkddgtfktraevkfegdtivnri
klkgidfkedgnilghkleynfnshkvyitadkqkngikanfkirhnvedgsvqladhyq
qntpigdgpvrlpdnhylstqsviledpnekrdhmvlhefvta