PDB entry 5afk
View 5afk on RCSB PDB site
Description: alpha7-AChBP in complex with lobeline and fragment 2
Class: transport protein
Keywords: transport protein, pentameric ligand-gated ion channels, cys-loop receptor, nicotinic acetylcholine receptor, allosteric modulation, drug discovery
Deposited on
2015-01-22, released
2015-05-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-06-29.
Experiment type: XRAY
Resolution: 2.38 Å
R-factor: N/A
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: acetylcholine-binding protein, neuronal acetylcholine receptor subunit alpha-7
Species: Lymnaea stagnalis [TaxId:6523]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5afka_ - Chain 'B':
Compound: acetylcholine-binding protein, neuronal acetylcholine receptor subunit alpha-7
Species: Lymnaea stagnalis [TaxId:6523]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5afkb_ - Chain 'C':
Compound: acetylcholine-binding protein, neuronal acetylcholine receptor subunit alpha-7
Species: Lymnaea stagnalis [TaxId:6523]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5afkc_ - Chain 'D':
Compound: acetylcholine-binding protein, neuronal acetylcholine receptor subunit alpha-7
Species: Lymnaea stagnalis [TaxId:6523]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5afkd_ - Chain 'E':
Compound: acetylcholine-binding protein, neuronal acetylcholine receptor subunit alpha-7
Species: Lymnaea stagnalis [TaxId:6523]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5afke_ - Heterogens: L0B, GOL, 5VU, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5afkA (A:)
gefqrklykelvknynpdviptqrdrpvtvyfslsllqimdvdeknqvvdvvfwlqmswt
dhylqwnvseypgvkqvsvpisslwvpdlaaynaiskpevltpqlalvnssghvqylpsi
rqrfscdvsgvdtesgatcklkfgswthhsreldlqmqeadisgyipysrfelvgvtqkr
serfyecckepypdvtftvtfrkkg
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5afkB (B:)
gefqrklykelvknynpdviptqrdrpvtvyfslsllqimdvdeknqvvdvvfwlqmswt
dhylqwnvseypgvkqvsvpisslwvpdlaaynaiskpevltpqlalvnssghvqylpsi
rqrfscdvsgvdtesgatcklkfgswthhsreldlqmqeadisgyipysrfelvgvtqkr
serfyecckepypdvtftvtfrkkg
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5afkC (C:)
gefqrklykelvknynpdviptqrdrpvtvyfslsllqimdvdeknqvvdvvfwlqmswt
dhylqwnvseypgvkqvsvpisslwvpdlaaynaiskpevltpqlalvnssghvqylpsi
rqrfscdvsgvdtesgatcklkfgswthhsreldlqmqeadisgyipysrfelvgvtqkr
serfyecckepypdvtftvtfrkkg
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>5afkD (D:)
gefqrklykelvknynpdviptqrdrpvtvyfslsllqimdvdeknqvvdvvfwlqmswt
dhylqwnvseypgvkqvsvpisslwvpdlaaynaiskpevltpqlalvnssghvqylpsi
rqrfscdvsgvdtesgatcklkfgswthhsreldlqmqeadisgyipysrfelvgvtqkr
serfyecckepypdvtftvtfrkkg
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>5afkE (E:)
gefqrklykelvknynpdviptqrdrpvtvyfslsllqimdvdeknqvvdvvfwlqmswt
dhylqwnvseypgvkqvsvpisslwvpdlaaynaiskpevltpqlalvnssghvqylpsi
rqrfscdvsgvdtesgatcklkfgswthhsreldlqmqeadisgyipysrfelvgvtqkr
serfyecckepypdvtftvtfrkkg