PDB entry 5ad0

View 5ad0 on RCSB PDB site
Description: complex of a b21 chicken mhc class i molecule and a 11mer chicken peptide
Deposited on 2015-08-19, released 2016-09-28
The last revision was dated 2016-09-28, with a file datestamp of 2016-09-23.
Experiment type: XRAY
Resolution: 2.84 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MHC class I alpha chain 2
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 11mer peptide
    Species: GALLUS GALLUS, synthetic [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 5AD0 (0-10)
  • Heterogens: CA, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >5ad0A (A:)
    mgscgalglglllaavcgaaaelhtlryirtamtdpgpglpwfvdvgyvdgelfmhynst
    arravprtewiaantdqqywdretqivqgseqinrenldilrrrynqtggshtvqwmsgc
    diledgtirgyhqaaydgrdfvafdkgtmtltaavpeavptkrkweeggyaeglkqylee
    tcvewlrryveygkaelgrrerpevrvwgkeadgiltlscrahgfyprpivvswlkdgav
    rgqdaqsggivpngdgtyhtwvtidaqpgdgdkyqcrvehaslpqpglyswrsggglndi
    feaqkiewhensssvdklaaalehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >5ad0A (A:)
    lhtlryirtamtdpgpglpwfvdvgyvdgelfmhynstarravprtewiaantdqqywdr
    etqivqgseqinrenldilrrrynqtggshtvqwmsgcdiledgtirgyhqaaydgrdfv
    afdkgtmtltaavpeavptkrkweeggyaeglkqyleetcvewlrryveygkaelgrrer
    pevrvwgkeadgiltlscrahgfyprpivvswlkdgavrgqdaqsggivpngdgtyhtwv
    tidaqpgdgdkyqcrvehaslpqpglysw
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >5ad0B (B:)
    dltpkvqvysrfpasagtknvlncfaagfhppkisitlmkdgvpmegaqysdmsfnddwt
    fqrlvhadftpssgstyackvehetlkepqvykwdpef
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >5ad0C (C:)
    ghaeeygadtl