PDB entry 5ad0
View 5ad0 on RCSB PDB site
Description: complex of a b21 chicken mhc class i molecule and a 11mer chicken peptide
Deposited on
2015-08-19, released
2016-09-28
The last revision was dated
2016-09-28, with a file datestamp of
2016-09-23.
Experiment type: XRAY
Resolution: 2.84 Å
R-factor: N/A
AEROSPACI score: 0.15
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: MHC class I alpha chain 2
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Beta-2-microglobulin
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: 11mer peptide
Species: GALLUS GALLUS, synthetic [TaxId:9031]
Database cross-references and differences (RAF-indexed):
- Heterogens: CA, EDO, HOH
PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.
- Chain 'A':
Sequence, based on SEQRES records:
>5ad0A (A:)
mgscgalglglllaavcgaaaelhtlryirtamtdpgpglpwfvdvgyvdgelfmhynst
arravprtewiaantdqqywdretqivqgseqinrenldilrrrynqtggshtvqwmsgc
diledgtirgyhqaaydgrdfvafdkgtmtltaavpeavptkrkweeggyaeglkqylee
tcvewlrryveygkaelgrrerpevrvwgkeadgiltlscrahgfyprpivvswlkdgav
rgqdaqsggivpngdgtyhtwvtidaqpgdgdkyqcrvehaslpqpglyswrsggglndi
feaqkiewhensssvdklaaalehhhhhh
Sequence, based on observed residues (ATOM records):
>5ad0A (A:)
lhtlryirtamtdpgpglpwfvdvgyvdgelfmhynstarravprtewiaantdqqywdr
etqivqgseqinrenldilrrrynqtggshtvqwmsgcdiledgtirgyhqaaydgrdfv
afdkgtmtltaavpeavptkrkweeggyaeglkqyleetcvewlrryveygkaelgrrer
pevrvwgkeadgiltlscrahgfyprpivvswlkdgavrgqdaqsggivpngdgtyhtwv
tidaqpgdgdkyqcrvehaslpqpglysw
- Chain 'B':
Sequence; same for both SEQRES and ATOM records:
>5ad0B (B:)
dltpkvqvysrfpasagtknvlncfaagfhppkisitlmkdgvpmegaqysdmsfnddwt
fqrlvhadftpssgstyackvehetlkepqvykwdpef
- Chain 'C':
Sequence; same for both SEQRES and ATOM records:
>5ad0C (C:)
ghaeeygadtl