PDB entry 4z9k
View 4z9k on RCSB PDB site
Description: Ricin A chain bound to camelid nanobody (VHH2)(F5)
Class: Hydrolase/Immune system
Keywords: Ricin toxin, nanobodies, Hydrolase-Immune system complex
Deposited on
2015-04-10, released
2016-07-20
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-12-11, with a file datestamp of
2019-12-06.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ricin
Species: Ricinus communis [TaxId:3988]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4z9ka_ - Chain 'B':
Compound: VHH2(F5) antibody
Species: VICUGNA PACOS [TaxId:30538]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4z9kb_ - Heterogens: EDO, ZN, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4z9kA (A:)
kqypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilvels
nhaelsvtlaldvtnayvvgyragnsayffhpdnqedaeaithlftdvqnrytfafggny
drleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqy
iegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfsvy
dvsilipiialmvyrcap
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4z9kB (B:)
vqlvesggglvqpggslrlscaasgftlddyaigwfrqvpgkeregvacvkdgstyyads
vkgrftisrdngavylqmnslkpedtavyycasrpcflgvplidfgswgqgtqvtv