PDB entry 4z6z

View 4z6z on RCSB PDB site
Description: Structure of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-sulfonyl catechol at 1.52 Ang resolution
Class: oxidoreductase
Keywords: Dioxygenase, 2-His-1-carboxylate facial triad, oxygen activation, acid-base catalysis, Oxidoreductase
Deposited on 2015-04-06, released 2015-08-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 1.52 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: homoprotocatechuate 2,3-dioxygenase
    Species: Brevibacterium fuscum [TaxId:47914]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4z6za1, d4z6za2
  • Chain 'B':
    Compound: homoprotocatechuate 2,3-dioxygenase
    Species: Brevibacterium fuscum [TaxId:47914]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4z6zb1, d4z6zb2
  • Chain 'C':
    Compound: homoprotocatechuate 2,3-dioxygenase
    Species: Brevibacterium fuscum [TaxId:47914]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4z6zc1, d4z6zc2
  • Chain 'D':
    Compound: homoprotocatechuate 2,3-dioxygenase
    Species: Brevibacterium fuscum [TaxId:47914]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4z6zd1, d4z6zd2
  • Heterogens: FE2, P6G, CL, MPO, CA, 4SX, PG4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4z6zA (A:)
msneipkpvapapdilrcayaelvvtdlaksrnfyvdvlglhvsyedenqiylrsfeefi
hhnlvltkgpvaalkamafrvrtpedvdkaeayyqelgcrterrkdgfvkgigdalrved
plgfpyefffetthverlhmrydlysagelvrldhfnqvtpdvprgrkyledlgfrvted
iqddegttyaawmhrkgtvhdtaltggngprlhhvafsthekhniiqicdkmgalrisdr
iergpgrhgvsnafylyildpdnhrieiytqdyytgdpdnptitwnvhdnqrrdwwgnpv
vpswyteaskvldldgnvqeiiertddselevtigadgfsftragdedgsyhgqaskgfk
lgnql

    Sequence, based on observed residues (ATOM records): (download) 
    >4z6zA (A:)
eipkpvapapdilrcayaelvvtdlaksrnfyvdvlglhvsyedenqiylrsfeefihhn
lvltkgpvaalkamafrvrtpedvdkaeayyqelgcrterrkdgfvkgigdalrvedplg
fpyefffetthverlhmrydlysagelvrldhfnqvtpdvprgrkyledlgfrvtediqd
degttyaawmhrkgtvhdtaltggngprlhhvafsthekhniiqicdkmgalrisdrier
gpgrhgvsnafylyildpdnhrieiytqdyytgdpdnptitwnvhdnqrrdwwgnpvvps
wyteaskvldldgnvqeiiertddselevtigadgfsftragdedgsyhgqaskg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4z6zB (B:)
msneipkpvapapdilrcayaelvvtdlaksrnfyvdvlglhvsyedenqiylrsfeefi
hhnlvltkgpvaalkamafrvrtpedvdkaeayyqelgcrterrkdgfvkgigdalrved
plgfpyefffetthverlhmrydlysagelvrldhfnqvtpdvprgrkyledlgfrvted
iqddegttyaawmhrkgtvhdtaltggngprlhhvafsthekhniiqicdkmgalrisdr
iergpgrhgvsnafylyildpdnhrieiytqdyytgdpdnptitwnvhdnqrrdwwgnpv
vpswyteaskvldldgnvqeiiertddselevtigadgfsftragdedgsyhgqaskgfk
lgnql

    Sequence, based on observed residues (ATOM records): (download) 
    >4z6zB (B:)
eipkpvapapdilrcayaelvvtdlaksrnfyvdvlglhvsyedenqiylrsfeefihhn
lvltkgpvaalkamafrvrtpedvdkaeayyqelgcrterrkdgfvkgigdalrvedplg
fpyefffetthverlhmrydlysagelvrldhfnqvtpdvprgrkyledlgfrvtediqd
degttyaawmhrkgtvhdtaltggngprlhhvafsthekhniiqicdkmgalrisdrier
gpgrhgvsnafylyildpdnhrieiytqdyytgdpdnptitwnvhdnqrrdwwgnpvvps
wyteaskvldldgnvqeiiertddselevtigadgfsftragdedgsyhgqaskgfklg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4z6zC (C:)
msneipkpvapapdilrcayaelvvtdlaksrnfyvdvlglhvsyedenqiylrsfeefi
hhnlvltkgpvaalkamafrvrtpedvdkaeayyqelgcrterrkdgfvkgigdalrved
plgfpyefffetthverlhmrydlysagelvrldhfnqvtpdvprgrkyledlgfrvted
iqddegttyaawmhrkgtvhdtaltggngprlhhvafsthekhniiqicdkmgalrisdr
iergpgrhgvsnafylyildpdnhrieiytqdyytgdpdnptitwnvhdnqrrdwwgnpv
vpswyteaskvldldgnvqeiiertddselevtigadgfsftragdedgsyhgqaskgfk
lgnql

    Sequence, based on observed residues (ATOM records): (download) 
    >4z6zC (C:)
eipkpvapapdilrcayaelvvtdlaksrnfyvdvlglhvsyedenqiylrsfeefihhn
lvltkgpvaalkamafrvrtpedvdkaeayyqelgcrterrkdgfvkgigdalrvedplg
fpyefffetthverlhmrydlysagelvrldhfnqvtpdvprgrkyledlgfrvtediqd
degttyaawmhrkgtvhdtaltggngprlhhvafsthekhniiqicdkmgalrisdrier
gpgrhgvsnafylyildpdnhrieiytqdyytgdpdnptitwnvhdnqrrdwwgnpvvps
wyteaskvldldgnvqeiiertddselevtigadgfsftragdedgsyhgqask

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4z6zD (D:)
msneipkpvapapdilrcayaelvvtdlaksrnfyvdvlglhvsyedenqiylrsfeefi
hhnlvltkgpvaalkamafrvrtpedvdkaeayyqelgcrterrkdgfvkgigdalrved
plgfpyefffetthverlhmrydlysagelvrldhfnqvtpdvprgrkyledlgfrvted
iqddegttyaawmhrkgtvhdtaltggngprlhhvafsthekhniiqicdkmgalrisdr
iergpgrhgvsnafylyildpdnhrieiytqdyytgdpdnptitwnvhdnqrrdwwgnpv
vpswyteaskvldldgnvqeiiertddselevtigadgfsftragdedgsyhgqaskgfk
lgnql

    Sequence, based on observed residues (ATOM records): (download) 
    >4z6zD (D:)
eipkpvapapdilrcayaelvvtdlaksrnfyvdvlglhvsyedenqiylrsfeefihhn
lvltkgpvaalkamafrvrtpedvdkaeayyqelgcrterrkdgfvkgigdalrvedplg
fpyefffetthverlhmrydlysagelvrldhfnqvtpdvprgrkyledlgfrvtediqd
degttyaawmhrkgtvhdtaltggngprlhhvafsthekhniiqicdkmgalrisdrier
gpgrhgvsnafylyildpdnhrieiytqdyytgdpdnptitwnvhdnqrrdwwgnpvvps
wyteaskvldldgnvqeiiertddselevtigadgfsftragdedgsyhgqaskgfklg