PDB entry 4yy1

View 4yy1 on RCSB PDB site
Description: The structure of hemagglutinin from a H6N1 influenza virus (A/chicken/Taiwan/A2837/2013) in complex with human receptor analog 6'SLNLN
Class: immune system
Keywords: Hemagglutinin, IMMUNE SYSTEM
Deposited on 2015-03-23, released 2016-03-23
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-03-23, with a file datestamp of 2016-03-18.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ha1
    Species: unidentified influenza virus [TaxId:119212]
    Database cross-references and differences (RAF-indexed):
    • PDB 4YY1 (0-324)
    Domains in SCOPe 2.07: d4yy1a_
  • Chain 'B':
    Compound: ha2
    Species: unidentified influenza virus [TaxId:119212]
    Database cross-references and differences (RAF-indexed):
    • PDB 4YY1 (0-163)
    Domains in SCOPe 2.07: d4yy1b_
  • Chain 'C':
    Compound: ha1
    Species: unidentified influenza virus [TaxId:119212]
    Database cross-references and differences (RAF-indexed):
    • PDB 4YY1 (0-324)
    Domains in SCOPe 2.07: d4yy1c_
  • Chain 'D':
    Compound: ha2
    Species: unidentified influenza virus [TaxId:119212]
    Database cross-references and differences (RAF-indexed):
    • PDB 4YY1 (0-163)
    Domains in SCOPe 2.07: d4yy1d_
  • Heterogens: NAG, SIA, GAL

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4yy1A (A:)
    dkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctiegw
    ilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfpks
    twagvdtsrgvtnacpsytldssfyrnlvwlvktdsatypvikgtynntgtqpilyfwgv
    hhppdttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpget
    lnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtiagvlktnktfqnvspl
    wigecpkyvkseslrlatglrnvpq
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4yy1B (B:)
    gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
    tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
    kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqk
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4yy1C (C:)
    dkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctiegw
    ilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfpks
    twagvdtsrgvtnacpsytldssfyrnlvwlvktdsatypvikgtynntgtqpilyfwgv
    hhppdttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpget
    lnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtiagvlktnktfqnvspl
    wigecpkyvkseslrlatglrnvpq
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4yy1D (D:)
    gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
    tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
    kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqk