PDB entry 4ytp
View 4ytp on RCSB PDB site
Description: CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH N-[(4-tert-butylphenyl)methyl]-2-(trifluoromethyl)benzamide
Class: oxidoreductase/oxidoreductase inhibitor
Keywords: OXIDOREDUCTASE, SUCCINATE DEHYDROGENASE, Complex II, Inhibitor, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR complex
Deposited on
2015-03-18, released
2015-08-05
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-02-05, with a file datestamp of
2020-01-31.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.12
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Species: Sus scrofa [TaxId:9823]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
Species: Sus scrofa [TaxId:9823]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4ytpb1, d4ytpb2 - Chain 'C':
Compound: Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
Species: Sus scrofa [TaxId:9823]
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial
Species: Sus scrofa [TaxId:9823]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4ytpd_ - Heterogens: FAD, FES, SF4, F3S, HEM, E23, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4ytpB (B:)
maavvavslkrwfpattlggaclqacrgaqtaaataprikkfaiyrwdpdktgdkphmqt
yeidlnncgpmvldalikikneidstltfrrscregicgscamninggntlactrridtn
ldkvskiyplphmyvikdlvpdlsnfyaqyksiepylkkkdesqegkqqylqsieerekl
dglyecilcaccstscpsywwngdkylgpavlmqayrwmidsrddfteerlaklqdpfsl
yrchtimnctgtcpkglnpgkaiaeikkmmatykekkasa
Sequence, based on observed residues (ATOM records): (download)
>4ytpB (B:)
prikkfaiyrwdpdktgdkphmqtyeidlnncgpmvldalikikneidstltfrrscreg
icgscamninggntlactrridtnldkvskiyplphmyvikdlvpdlsnfyaqyksiepy
lkkkdesqegkqqylqsieerekldglyecilcaccstscpsywwngdkylgpavlmqay
rwmidsrddfteerlaklqdpfslyrchtimnctgtcpkglnpgkaiaeikkmmatyke
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4ytpD (D:)
matlwrlsvlcgargggalvlrtsvvrpahvsaflqdrhtpgwcgvqhihlspshqassk
aaslhwtgervvsvlllgllpaaylnpcsamdyslaaaltlhghwgigqvvtdyvrgdal
qkvakagllalsaftfaglcyfnyhdvgickavamlwkl
Sequence, based on observed residues (ATOM records): (download)
>4ytpD (D:)
sskaaslhwtgervvsvlllgllpaaylnpcsamdyslaaaltlhghwgigqvvtdyvrg
dalqkvakagllalsaftfaglcyfnyhdvgickavamlwkl