PDB entry 4yr7

View 4yr7 on RCSB PDB site
Description: Structure of LuxP In Complex With 1-deoxy-alpha-L-xylulofuranose-1,2-borate
Class: signaling protein
Keywords: PROTEIN-LIGAND COMPLEX, QUORUM SENSING, signaling protein
Deposited on 2015-03-14, released 2016-03-23
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-13, with a file datestamp of 2017-09-08.
Experiment type: XRAY
Resolution: 2.53 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Autoinducer 2-binding periplasmic protein luxP
    Species: Vibrio harveyi [TaxId:669]
    Gene: luxP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4yr7a_
  • Chain 'B':
    Compound: Autoinducer 2-binding periplasmic protein luxP
    Species: Vibrio harveyi [TaxId:669]
    Gene: luxP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4yr7b_
  • Heterogens: A1B, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4yr7A (A:)
gsmvlngywgyqefldefpeqrnltnalseavraqpvplskptqrpikisvvypgqqvsd
ywvrniasfekrlyklninyqlnqvftrpnadikqqslslmealksksdyliftldttrh
rkfvehvldstntklilqnittpvrewdkhqpflyvgfdhaegsrelatefgkffpkhty
ysvlyfsegyisdvrgdtfihqvnrdnnfelqsayytkatkqsgydaakaslakhpdvdf
iyacstdvalgavdalaelgredimingwgggsaeldaiqkgdlditvmrmnddtgiama
eaikwdledkpvptvysgdfeivtkadsperiealkkrafrysdn

    Sequence, based on observed residues (ATOM records): (download) 
    >4yr7A (A:)
ngywgyqefldefpeqrnltnalseavraqpvplskptqrpikisvvypgqqvsdywvrn
iasfekrlyklninyqlnqvftrpnadikqqslslmealksksdyliftldttrhrkfve
hvldstntklilqnittpvrewdkhqpflyvgfdhaegsrelatefgkffpkhtyysvly
fsegyisdvrgdtfihqvnrdnnfelqsayytkatkqsgydaakaslakhpdvdfiyacs
tdvalgavdalaelgredimingwgggsaeldaiqkgdlditvmrmnddtgiamaeaikw
dledkpvptvysgdfeivtkadsperiealkkrafrysd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4yr7B (B:)
gsmvlngywgyqefldefpeqrnltnalseavraqpvplskptqrpikisvvypgqqvsd
ywvrniasfekrlyklninyqlnqvftrpnadikqqslslmealksksdyliftldttrh
rkfvehvldstntklilqnittpvrewdkhqpflyvgfdhaegsrelatefgkffpkhty
ysvlyfsegyisdvrgdtfihqvnrdnnfelqsayytkatkqsgydaakaslakhpdvdf
iyacstdvalgavdalaelgredimingwgggsaeldaiqkgdlditvmrmnddtgiama
eaikwdledkpvptvysgdfeivtkadsperiealkkrafrysdn

    Sequence, based on observed residues (ATOM records): (download) 
    >4yr7B (B:)
ngywgyqefldefpeqrnltnalseavraqpvplskptqrpikisvvypgqqvsdywvrn
iasfekrlyklninyqlnqvftrpnadikqqslslmealksksdyliftldttrhrkfve
hvldstntklilqnittpvrewdkhqpflyvgfdhaegsrelatefgkffpkhtyysvly
fsegyisdvrgdtfihqvnrdnnfelqsayytkatkqsgydaakaslakhpdvdfiyacs
tdvalgavdalaelgredimingwgggsaeldaiqkgdlditvmrmnddtgiamaeaikw
dledkpvptvysgdfeivtkadsperiealkkrafrysdn