PDB entry 4yqo
View 4yqo on RCSB PDB site
Description: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Class: transferase/transferase inhibitor
Keywords: TrmD, SAM-binding, knot, transferase-transferase inhibitor complex
Deposited on
2015-03-13, released
2016-03-16
The last revision prior to the SCOPe 2.08 freeze date was dated
2016-03-16, with a file datestamp of
2016-03-11.
Experiment type: XRAY
Resolution: 1.68 Å
R-factor: N/A
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: tRNA (guanine-N(1)-)-methyltransferase
Species: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) [TaxId:71421]
Gene: trmD, HI_0202
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4yqoa1, d4yqoa2 - Heterogens: 4H1, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4yqoA (A:)
glvprgshmwigvislfpemfkaitefgvtgravkhnllkvecwnprdftfdkhktvddr
pygggpgmlmmvqplrdaihtakaaagegakviylspqgrkldqggvtelaqnqklilvc
gryegiderliqteideewsigdyvltggelpamtlidavarfipgvlgkqasaeedsfa
dglldcphytrpevlegltvppvlmsghheeirkwrlkqslqrtwlrrpelleglaltde
qrkllkeaqaehns
Sequence, based on observed residues (ATOM records): (download)
>4yqoA (A:)
glvprgshmwigvislfpemfkaitefgvtgravkhnllkvecwnprdftfdkhktvddr
pygggpgmlmmvqplrdaihtakaaagegakviylspqgrkldqggvtelaqnqklilvc
gryegiderliqteideewsigdyvltggelpamtlidavarfipgvldglldcphytrp
evlegltvppvlmsghheeirkwrlkqslqrtwlrrpelleglaltdeqrkllkeaqaeh
ns