PDB entry 4ypg
View 4ypg on RCSB PDB site
Description: Structural Insights Into the Neutralization Properties of a Human Anti-Interferon Monoclonal Antibody
Class: immune system
Keywords: therapeutic mAb, IFN-alpha2A
Deposited on
2015-03-12, released
2015-05-06
The last revision prior to the SCOPe 2.05 freeze date was dated
2015-05-06, with a file datestamp of
2015-05-01.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.13
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Sifalimumab light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q6PJF2 (0-214)
- conflict (8)
- conflict (27)
- conflict (31)
- conflict (48-49)
- conflict (51)
- conflict (95-96)
- conflict (100)
- conflict (105)
Domains in SCOPe 2.05: d4ypga1, d4ypga2 - Chain 'B':
Compound: Sifalimumab heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Interferon alpha-2
Species: Homo sapiens [TaxId:9606]
Gene: IFNA2, IFNA2A, IFNA2B, IFNA2C
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4ypgc_ - Chain 'D':
Compound: Interferon alpha-2
Species: Homo sapiens [TaxId:9606]
Gene: IFNA2, IFNA2A, IFNA2B, IFNA2C
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4ypgd_ - Chain 'H':
Compound: Sifalimumab heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Sifalimumab light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot Q6PJF2 (0-214)
- conflict (8)
- conflict (27)
- conflict (31)
- conflict (48-49)
- conflict (51)
- conflict (95-96)
- conflict (100)
- conflict (105)
Domains in SCOPe 2.05: d4ypgl1, d4ypgl2 - Heterogens: NI, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4ypgA (A:)
eivltqspgtlslspgeratlscrasqsvsstylawyqqkpgqaprlliygassratgip
drfsgsgsgtdftltisrlepedfavyycqqygssprtfgqgtkveikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4ypgC (C:)
tscdlpqthslgsrrtlmllaqmrkislfsclkdrhdfgfpqeefgnqfqkaetipvlhe
miqqifnlfstkdssaawdetlldkfytelyqqlndleacviqgvgvtetplmkedsila
vrkyfqritlylkekkyspcawevvraeimrsfslstnlqe
Sequence, based on observed residues (ATOM records): (download)
>4ypgC (C:)
tscdlpqthslgsrrtlmllaqmrkislfsclkdrhdfgfpqeefgnqfqkaetipvlhe
miqqifnlfstkdssaawdetlldkfytelyqqlndleacviqgvgvtetplmkedsila
vrkyfqritlylkekkyspcawevvraeimrsfslstnl
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>4ypgD (D:)
tscdlpqthslgsrrtlmllaqmrkislfsclkdrhdfgfpqeefgnqfqkaetipvlhe
miqqifnlfstkdssaawdetlldkfytelyqqlndleacviqgvgvtetplmkedsila
vrkyfqritlylkekkyspcawevvraeimrsfslstnlqe
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>4ypgL (L:)
eivltqspgtlslspgeratlscrasqsvsstylawyqqkpgqaprlliygassratgip
drfsgsgsgtdftltisrlepedfavyycqqygssprtfgqgtkveikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec