PDB entry 4ynb

View 4ynb on RCSB PDB site
Description: Crystal structure of Helicobacter pylori 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN) complexed with pyrazinylthio-DADMe-Immucillin-A
Class: Hydrolase/inhibitor
Keywords: Hydrolase-inhibitor complex
Deposited on 2015-03-09, released 2015-11-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-25, with a file datestamp of 2019-12-20.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aminodeoxyfutalosine nucleosidase
    Species: Helicobacter pylori [TaxId:85963]
    Gene: mtnN, mtn, jhp_0082
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9ZMY2 (16-244)
      • expression tag (15)
    Domains in SCOPe 2.08: d4ynba1, d4ynba2
  • Heterogens: 4EH, GOL, PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4ynbA (A:)
    mghhhhhhenlyfqgvqkigilgamreeitpilelfgvdfeeiplggnvfhkgvyhnkei
    ivayskigkvhstltttsmilafgvqkvlfsgvagslvkdlkindllvatqlvqhdvdls
    afdhplgfipesaifietsgslnalakkianeqhialkegviasgdqfvhskerkeflvs
    efkasavemegasvafvcqkfgvpccvlrsisdnadekagmsfdefleksahtsakflks
    mvdel
    

    Sequence, based on observed residues (ATOM records): (download)
    >4ynbA (A:)
    vqkigilgamreeitpilelfgvdfeeiplggnvfhkgvyhnkeiivayskigkvhstlt
    ttsmilafgvqkvlfsgvagslvkdlkindllvatqlvqhdvdlsafdhplgfipesaif
    ietsgslnalakkianeqhialkegviasgdqfvhskerkeflvsefkasavemegasva
    fvcqkfgvpccvlrsisdnadekagmsfdefleksahtsakflksmvdel