PDB entry 4ylz
View 4ylz on RCSB PDB site
Description: Crystal structure of the human galectin-4 C-terminal carbohydrate recognition domain in complex with lacto-N-neotetraose (LNnT)
Class: sugar binding protein
Keywords: galectin, lectin, sugar binding protein, carbohydrate binding protein, lacto-N-neotetraose, carbohydrate recognition, beta sandwich, glycosphingolipid
Deposited on
2015-03-06, released
2015-07-01
The last revision prior to the SCOPe 2.05 freeze date was dated
2015-09-09, with a file datestamp of
2015-09-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Galectin-4
Species: Homo sapiens [TaxId:9606]
Gene: LGALS4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4ylza_ - Chain 'B':
Compound: Galectin-4
Species: Homo sapiens [TaxId:9606]
Gene: LGALS4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4ylzb_ - Chain 'C':
Compound: Galectin-4
Species: Homo sapiens [TaxId:9606]
Gene: LGALS4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4ylzc_ - Chain 'D':
Compound: Galectin-4
Species: Homo sapiens [TaxId:9606]
Gene: LGALS4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4ylzd_ - Heterogens: LAT, NAG, GAL, GOL, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4ylzA (A:)
hchqqlnslptmegpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgss
gdialhinprmgngtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyan
gqhlfdfahrlsafqrvdtleiqgdvtlsyvqi
Sequence, based on observed residues (ATOM records): (download)
>4ylzA (A:)
ptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgssgdialhinprmgngt
vvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyangqhlfdfahrlsafq
rvdtleiqgdvtlsyvqi
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4ylzB (B:)
hchqqlnslptmegpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgss
gdialhinprmgngtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyan
gqhlfdfahrlsafqrvdtleiqgdvtlsyvqi
Sequence, based on observed residues (ATOM records): (download)
>4ylzB (B:)
ptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgssgdialhinprmgngt
vvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyangqhlfdfahrlsafq
rvdtleiqgdvtlsyvqi
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4ylzC (C:)
hchqqlnslptmegpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgss
gdialhinprmgngtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyan
gqhlfdfahrlsafqrvdtleiqgdvtlsyvqi
Sequence, based on observed residues (ATOM records): (download)
>4ylzC (C:)
gpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgssgdialhinprmgn
gtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyangqhlfdfahrlsa
fqrvdtleiqgdvtlsyvqi
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4ylzD (D:)
hchqqlnslptmegpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgss
gdialhinprmgngtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyan
gqhlfdfahrlsafqrvdtleiqgdvtlsyvqi
Sequence, based on observed residues (ATOM records): (download)
>4ylzD (D:)
gpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgssgdialhinprmgn
gtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyangqhlfdfahrlsa
fqrvdtleiqgdvtlsyvqi