PDB entry 4y1q

View 4y1q on RCSB PDB site
Description: Crystal Structure of HasA mutant Y75A monomer from Yersinia pseudotuberculosis
Class: heme binding protein
Keywords: heme acquisition system, hemophore, HEME BINDING PROTEIN
Deposited on 2015-02-08, released 2015-08-12
The last revision prior to the SCOPe 2.07 freeze date was dated 2016-01-06, with a file datestamp of 2015-12-31.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Extracellular heme acquisition hemophore HasA
    Species: Yersinia pseudotuberculosis IP 32953 [TaxId:273123]
    Gene: HasA, YPTB0114
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66G68
      • engineered mutation (86)
    Domains in SCOPe 2.07: d4y1qa_
  • Chain 'B':
    Compound: Extracellular heme acquisition hemophore HasA
    Species: Yersinia pseudotuberculosis IP 32953 [TaxId:273123]
    Gene: HasA, YPTB0114
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66G68
      • engineered mutation (86)
    Domains in SCOPe 2.07: d4y1qb_
  • Chain 'D':
    Compound: Extracellular heme acquisition hemophore HasA
    Species: Yersinia pseudotuberculosis IP 32953 [TaxId:273123]
    Gene: HasA, YPTB0114
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66G68
      • engineered mutation (86)
    Domains in SCOPe 2.07: d4y1qd_
  • Chain 'G':
    Compound: Extracellular heme acquisition hemophore HasA
    Species: Yersinia pseudotuberculosis IP 32953 [TaxId:273123]
    Gene: HasA, YPTB0114
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66G68
      • engineered mutation (86)
    Domains in SCOPe 2.07: d4y1qg_
  • Chain 'I':
    Compound: Extracellular heme acquisition hemophore HasA
    Species: Yersinia pseudotuberculosis IP 32953 [TaxId:273123]
    Gene: HasA, YPTB0114
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66G68
      • engineered mutation (86)
    Domains in SCOPe 2.07: d4y1qi_
  • Chain 'K':
    Compound: Extracellular heme acquisition hemophore HasA
    Species: Yersinia pseudotuberculosis IP 32953 [TaxId:273123]
    Gene: HasA, YPTB0114
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66G68
      • engineered mutation (86)
    Domains in SCOPe 2.07: d4y1qk_
  • Chain 'M':
    Compound: Extracellular heme acquisition hemophore HasA
    Species: Yersinia pseudotuberculosis IP 32953 [TaxId:273123]
    Gene: HasA, YPTB0114
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66G68
      • engineered mutation (86)
    Domains in SCOPe 2.07: d4y1qm_
  • Chain 'O':
    Compound: Extracellular heme acquisition hemophore HasA
    Species: Yersinia pseudotuberculosis IP 32953 [TaxId:273123]
    Gene: HasA, YPTB0114
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66G68
      • engineered mutation (86)
    Domains in SCOPe 2.07: d4y1qo_
  • Heterogens: HEM

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4y1qA (A:)
    mrgshhhhhhgsmsttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsst
    lfsgtqyaigsshsnpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkh
    lekiditfneldlsgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdta
    fkdlsiasqypdsgymsdapmvdtvgvmdsndmllaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >4y1qA (A:)
    sttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsstlfsgtqyaigssh
    snpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkhlekiditfneldl
    sgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdtafkdlsiasqypd
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4y1qB (B:)
    mrgshhhhhhgsmsttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsst
    lfsgtqyaigsshsnpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkh
    lekiditfneldlsgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdta
    fkdlsiasqypdsgymsdapmvdtvgvmdsndmllaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >4y1qB (B:)
    sttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsstlfsgtqyaigssh
    snpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkhlekiditfneldl
    sgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdtafkdlsiasqypd
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4y1qD (D:)
    mrgshhhhhhgsmsttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsst
    lfsgtqyaigsshsnpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkh
    lekiditfneldlsgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdta
    fkdlsiasqypdsgymsdapmvdtvgvmdsndmllaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >4y1qD (D:)
    sttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsstlfsgtqyaigssh
    snpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkhlekiditfneldl
    sgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdtafkdlsiasqypd
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >4y1qG (G:)
    mrgshhhhhhgsmsttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsst
    lfsgtqyaigsshsnpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkh
    lekiditfneldlsgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdta
    fkdlsiasqypdsgymsdapmvdtvgvmdsndmllaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >4y1qG (G:)
    sttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsstlfsgtqyaigssh
    snpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkhlekiditfneldl
    sgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdtafkdlsiasqypd
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >4y1qI (I:)
    mrgshhhhhhgsmsttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsst
    lfsgtqyaigsshsnpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkh
    lekiditfneldlsgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdta
    fkdlsiasqypdsgymsdapmvdtvgvmdsndmllaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >4y1qI (I:)
    sttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsstlfsgtqyaigssh
    snpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkhlekiditfneldl
    sgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdtafkdlsiasqypd
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >4y1qK (K:)
    mrgshhhhhhgsmsttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsst
    lfsgtqyaigsshsnpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkh
    lekiditfneldlsgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdta
    fkdlsiasqypdsgymsdapmvdtvgvmdsndmllaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >4y1qK (K:)
    sttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsstlfsgtqyaigssh
    snpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkhlekiditfneldl
    sgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdtafkdlsiasqypd
    

  • Chain 'M':
    Sequence, based on SEQRES records: (download)
    >4y1qM (M:)
    mrgshhhhhhgsmsttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsst
    lfsgtqyaigsshsnpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkh
    lekiditfneldlsgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdta
    fkdlsiasqypdsgymsdapmvdtvgvmdsndmllaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >4y1qM (M:)
    sttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsstlfsgtqyaigssh
    snpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkhlekiditfneldl
    sgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdtafkdlsiasqypd
    

  • Chain 'O':
    Sequence, based on SEQRES records: (download)
    >4y1qO (O:)
    mrgshhhhhhgsmsttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsst
    lfsgtqyaigsshsnpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkh
    lekiditfneldlsgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdta
    fkdlsiasqypdsgymsdapmvdtvgvmdsndmllaa
    

    Sequence, based on observed residues (ATOM records): (download)
    >4y1qO (O:)
    sttiqynsnyadysissylrewannfgdidqapaetkdrgsfsgsstlfsgtqyaigssh
    snpegmiaegdlkasfmpqhtfhgqidtlqfgkdlatnaggpsagkhlekiditfneldl
    sgefdsgksmtenhqgdmhksvrglmkgnpdpmlevmkakginvdtafkdlsiasqypd