PDB entry 4xkh
View 4xkh on RCSB PDB site
Description: crystal structure of the airapl tandem uims in complex with a lys48-linked tri-ubiquitin
Class: ubiquitin-binding protein
Keywords: tandem ubiquitin-interacting motifs, ubiquitin-binding, ubiquitin-binding protein
Deposited on
2015-01-11, released
2016-02-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2016-03-09, with a file datestamp of
2016-03-04.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.13
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Polyubiquitin-C
Species: Bos taurus [TaxId:9913]
Gene: UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4xkha_ - Chain 'B':
Compound: Polyubiquitin-C
Species: Bos taurus [TaxId:9913]
Gene: UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4xkhb_ - Chain 'C':
Compound: AN1-type zinc finger protein 2B
Species: Mus musculus [TaxId:10090]
Gene: Zfand2b, Airapl
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: Polyubiquitin-C
Species: Bos taurus [TaxId:9913]
Gene: UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4xkhd_ - Chain 'E':
Compound: AN1-type zinc finger protein 2B
Species: Mus musculus [TaxId:10090]
Gene: Zfand2b, Airapl
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: Polyubiquitin-C
Species: Bos taurus [TaxId:9913]
Gene: UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4xkhf_ - Chain 'G':
Compound: Polyubiquitin-C
Species: Bos taurus [TaxId:9913]
Gene: UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4xkhg_ - Chain 'H':
Compound: AN1-type zinc finger protein 2B
Species: Mus musculus [TaxId:10090]
Gene: Zfand2b, Airapl
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: Polyubiquitin-C
Species: Bos taurus [TaxId:9913]
Gene: UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4xkhi_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4xkhA (A:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>4xkhA (A:)
qifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyni
qkestlhlvlrl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4xkhB (B:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>4xkhB (B:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4xkhD (D:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>4xkhD (D:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl
- Chain 'E':
No sequence available.
- Chain 'F':
Sequence, based on SEQRES records: (download)
>4xkhF (F:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>4xkhF (F:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>4xkhG (G:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
- Chain 'H':
No sequence available.
- Chain 'I':
Sequence, based on SEQRES records: (download)
>4xkhI (I:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>4xkhI (I:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl