PDB entry 4xkg

View 4xkg on RCSB PDB site
Description: Crystal structure of hemagglutinin from Taiwan (2013) H6N1 influenza virus in complex with 6'-SLN
Class: viral protein
Keywords: viral protein
Deposited on 2015-01-11, released 2015-04-01
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-04-01, with a file datestamp of 2015-03-27.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus [TaxId:119212]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • PDB 4XKG
    Domains in SCOPe 2.06: d4xkga_
  • Chain 'B':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus [TaxId:119212]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • PDB 4XKG (0-End)
    Domains in SCOPe 2.06: d4xkgb_
  • Chain 'C':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus [TaxId:119212]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • PDB 4XKG
    Domains in SCOPe 2.06: d4xkgc_
  • Chain 'D':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus [TaxId:119212]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • PDB 4XKG (0-End)
    Domains in SCOPe 2.06: d4xkgd_
  • Chain 'E':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus [TaxId:119212]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • PDB 4XKG
    Domains in SCOPe 2.06: d4xkge_
  • Chain 'F':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus [TaxId:119212]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • PDB 4XKG (0-End)
    Domains in SCOPe 2.06: d4xkgf_
  • Heterogens: NAG, SIA, GAL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4xkgA (A:)
adpgdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdct
iegwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfem
fpkstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpily
fwgvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlr
pgetlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfqn
vsplwigecpkyvkseslrlatglrnvpqiatr

    Sequence, based on observed residues (ATOM records): (download) 
    >4xkgA (A:)
pgdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctie
gwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfp
kstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpilyfw
gvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpg
etlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfqnvs
plwigecpkyvkseslrlatglrnvpqiat

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4xkgB (B:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkesklnrqgiegrlvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >4xkgB (B:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkesklnrqgi

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4xkgC (C:)
adpgdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdct
iegwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfem
fpkstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpily
fwgvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlr
pgetlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfqn
vsplwigecpkyvkseslrlatglrnvpqiatr

    Sequence, based on observed residues (ATOM records): (download) 
    >4xkgC (C:)
gdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctieg
wilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfpk
stwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpilyfwg
vhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpge
tlnvesngnliapwyaykfvskgavfksdlpiencdatcqtitgvlrtnktfqnvsplwi
gecpkyvkseslrlatglrnvpqiat

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4xkgD (D:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkesklnrqgiegrlvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >4xkgD (D:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkesklnrqgi

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4xkgE (E:)
adpgdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdct
iegwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfem
fpkstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpily
fwgvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlr
pgetlnvesngnliapwyaykfvstnkkgavfksdlpiencdatcqtitgvlrtnktfqn
vsplwigecpkyvkseslrlatglrnvpqiatr

    Sequence, based on observed residues (ATOM records): (download) 
    >4xkgE (E:)
pgdkicigyhannsttqvdtlleknvtvthsvellenqkekrfckimnkapldlkdctie
gwilgnpkcdlllgdqswsyiverpnaqngicypgvlneleelkafigsgerverfemfp
kstwagvdtsrgvtnacpsytidssfyrnlvwivktdsatypvikgtynntgtqpilyfw
gvhhpldttvqdnlygsgdkyvrmgtesmnfakspeiaarpavngqrsridyywsvlrpg
etlnvesngnliapwyaykfvskkgavfksdlpiencdatcqtitgvlrtnktfqnvspl
wigecpkyvkseslrlatglrnvpq

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4xkgF (F:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkesklnrqgiegrlvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >4xkgF (F:)
gifgaiagfieggwtgmidgwygyhhensqgsgyaadrestqkaidgitnkvnsiinkmn
tqfeavdhefsnlerrignlnkrmedgfldvwtynaellvllenertldlhdanvknlye
kvksqlrdnandlgngcfefwhkcdnecmesvkngtydypkyqkesklnrqg